Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 >seq5 Length=4166812 Score = 150 bits (166), Expect = 2e-31 Identities = 210/292 (72%), Gaps = 7/292 (2%) Strand=Plus/Minus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||| || ||||| | ||||||||| | || |||| ||||| ||||| || | Sbjct 871856 ACAGGCAAAGTCGCAATGGAGACCTTCGTCACGACTGATCAACTCGTTGGAAAAGGTGAG 871797 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAG--CGGCAAATGACCCAGAAAAG 4664 || ||||| | ||| | ||| || |||||||| || | | | || | | | ||||| Sbjct 871796 ACCTGGCATGAGACCACGCTTCTTGAGCCAAAAGATCGAACAGAAACTACCACTGAAAAA 871737 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 ||| ||||| ||||||||||| ||||| || || | ||||| ||| ||| Sbjct 871736 GATA--CCTTCAACGGCGGCAAAAGCTACCAAACGTTCGGCAAACGACTTGGAGTTGG-- 871681 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||||| | || ||||||| |||||||||||| || || ||||| || | || || Sbjct 871680 -TAATCCATCTCAAAGCCCAGTCAGCTTTTTTCTTTACACATGGAATAGTTTCAATTGCA 871622 Query 4785 TTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTA 4836 ||||||||| |||||||| ||| | || |||||| || || |||| || Sbjct 871621 TTAAATAATACCTTTTTTTCATCTGGATTTTTAATATATGTATCAATTAATA 871570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049469883325