Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq21 143 6e-29 seq5 138 3e-27 seq24 132 1e-25 seq2 125 2e-23 >seq21 Length=1919465 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| ||||| ||||| |||||||||||||| |||| | |||||| Sbjct 1444879 GAGACGGAGGACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCT 1444820 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||||| ||| ||||| |||||||| | || || || | | || ||||| Sbjct 1444819 GCCGTCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTC 1444760 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||||| | || | | |||| |||| || ||||| || || Sbjct 1444759 CTTGTCTTGAATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGT 1444700 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| || |||| ||||| Sbjct 1444699 GATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| ||||| || || ||||| ||||||||||| | |||||||| Sbjct 1444651 GAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCT 1444592 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || || |||||||| | || || || | | |||||||| Sbjct 1444591 GCCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATTCCTTC 1444532 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || |||||| |||| | |||| || | ||| ||||||||||| Sbjct 1444531 CTTGTCTTGGATCTTGGTCTTGACATTCTCGATAGTGTCAGATCCCTCGACTTCAAGAGT 1444472 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | ||||| || |||| ||||| Sbjct 1444471 GATGGTCTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 1444433 Score = 136 bits (150), Expect = 9e-27 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| ||||| |||||||||||||| |||| | |||||| Sbjct 1445335 GAGACGGAGGACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCT 1445276 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 || ||||| || ||||| || || |||||||| | || || || | | || ||| Sbjct 1445275 GCCGTCTTCGAGCTGCTTT--CCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCT 1445218 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || || ||||||| | || | | |||| || | ||| ||||||||| Sbjct 1445217 TCCTTGTCTTGGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGA 1445158 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || | ||||| || |||| ||||| Sbjct 1445157 GTGATGGTCTTACCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||| || || ||||| ||||||||||| | |||||||| || ||| Sbjct 1445100 AGGACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGCCGTCT 1445041 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| ||||| || || || | || || || | | || |||||||| ||| Sbjct 1445040 TCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCT 1444981 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || |||||| |||| | | |||| || | ||| ||||||||||| || || Sbjct 1444980 TGAATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATGGTC 1444921 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| || |||| ||||| Sbjct 1444920 TTACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 Score = 114 bits (126), Expect = 3e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 || ||||| ||||| || || ||||| ||||| || |||| |||||||| || |||||| Sbjct 1352816 ACGAGATGGAGAGTTGATTCCTTTTGAATGTTATAGTCGGACAAAGTTCTTCCGTCTTCT 1352757 Query 151956 AG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTT 152013 | ||||| || || |||||||| | || || || | | || |||||||| |||| Sbjct 1352756 AATTGCTTT--CCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 1352699 Query 152014 GAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTT 152073 |||| || |||||| |||| | |||| || | || ||||||||||| || || | Sbjct 1352698 GAATCTTGGCCTTGACATTCTCGATAGTGTCGGATCCTTCAACTTCAAGAGTGATGGTCT 1352639 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || | ||||| || |||| ||||| Sbjct 1352638 TACCGGTTAATGTCTTTACAAAGATTTGCAT 1352608 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| || || ||||||||||| ||||||| | ||| | Sbjct 1352370 GAGACGGAGGACGAGATGGAGAGTTGATTCCTTTTGGATGTTATAATCGGAAAGAGTACG 1352311 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||||| ||| || || ||||| | || || || || | | || ||||| Sbjct 1352310 TCCGTCTTCTAATTGTTTACCTGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTC 1352251 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || |||||| | || | |||| || | || ||||| || || Sbjct 1352250 CTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGT 1352191 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| || |||| ||||| Sbjct 1352190 GATTGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1352152 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| ||||| || || ||||| ||||||||||| | |||||||| Sbjct 1444423 GAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCT 1444364 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| | ||| ||||| || || || | || || || | | || ||||| Sbjct 1444363 GCCGTCTTCCAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTC 1444304 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || |||||| | || | |||| |||| || || || | || Sbjct 1444303 CTTGTCTTGGATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGT 1444244 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || || | ||| || || || | ||||| Sbjct 1444243 AATGGTCTTACCAGTTAAAGTTTTTACAAAAATTTGCAT 1444205 >seq5 Length=4166812 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||||||||| |||||||||||||| |||| | || | Sbjct 207602 GAGACGGAGGACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACG 207543 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||| |||||||| | || ||||| | | ||| ||||| Sbjct 207542 ACCGTCTTCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGGTCAGGTGGGATACCTTC 207483 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| |||| |||||| || | || Sbjct 207482 CTTGTCTTGGATCTTAGCCTTGACGTTTTCGATAGTGTCGGAACCCTCTACCTCTAAGGT 207423 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 ||| || || || ||||| || || ||||||| |||||||| Sbjct 207422 AATGGTCTTACCTGTGAGTGTTTTAACGAAGATCTGCATTT 207382 >seq24 Length=3408800 Score = 132 bits (146), Expect = 1e-25 Identities = 162/220 (74%), Gaps = 1/220 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| || || ||||||||||||||||| | | ||||| Sbjct 192190 GAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCT 192249 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT- 152004 ||||| |||| ||| |||||||| || || | || || || | | ||| |||| Sbjct 192250 ACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTC 192309 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| ||||| || || |||||| | || | | |||| || | ||| |||||||||| Sbjct 192310 CCTTGTCTTGGATCTTGGTCTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAG 192369 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||| ||||| || |||| ||||| Sbjct 192370 TGATGGTCTTACCAGTGAGGGTCTTGACAAAGATTTGCAT 192409 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| Sbjct 192426 AGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTTCGGCCGTCT 192485 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| ||||| ||||| || | || || || | | ||| |||||||| ||| Sbjct 192486 TCTAATTGTTTACCGGCAAAGATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCT 192545 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || |||||| | || | |||| |||| || ||||| | || || || Sbjct 192546 TGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTC 192605 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||| || |||| ||||| Sbjct 192606 TTGCCGGTCAATGTCTTGACAAAGATTTGCAT 192637 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||||||||| ||||| || || ||||| ||||||||||| | | ||||| Sbjct 191962 GAGACGGAGGACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGAGAGGGTTCT 192021 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| |||| ||| ||||| |||||||| | || || || | | ||| ||||| Sbjct 192022 GCCATCCTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTC 192081 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || || || | || | | |||| || | || ||||||||||| Sbjct 192082 CTTGTCTTGAATCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGACTTCAAGAGT 192141 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || | ||||| || |||| |||||| Sbjct 192142 GATGGTCTTACCAGTCAATGTCTTGACAAAGATCTGCAT 192180 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| || || |||||||||||||| || | |||||||| Sbjct 192647 GAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCCGACAAAGTTCT 192706 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||||| ||| ||||| |||||||| | || || || | | ||| ||||| Sbjct 192707 GCCGTCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTC 192766 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || |||||| | || | |||| || | || ||||| || || Sbjct 192767 CTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGT 192826 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| || || | ||||| Sbjct 192827 GATGGTCTTACCAGTGAGGGTCTTGACAAAAATTTGCAT 192865 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| || || ||||||||||||||||| | | ||||| Sbjct 192875 GAGACGGAGGACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAATCCGAGAGGGTTCT 192934 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| |||| ||| |||||||| || || | || || || | | ||| ||||| Sbjct 192935 ACCATCCTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGTGGGATACCTTC 192994 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || |||||| | || | |||| || | |||||||| | || Sbjct 192995 CTTGTCTTGAATCTTGGTCTTGACATTTTCGATAGTGTCAGAGCCTTCTACTTCCAAGGT 193054 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| ||||| || || | || || || |||| |||||| Sbjct 193055 AATGGTTTTACCTGTTAATGTTTTAACAAAGATTTGCATT 193094 >seq2 Length=1770755 Score = 125 bits (138), Expect = 2e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || || | ||| || ||||| || ||||| || ||||||||||||||||| | | || Sbjct 948829 CTAAGGCGGAGAACGAGATGGAGGGTAGATTCCTTTTGGATGTTGTAATCCGAGAGGGTA 948888 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || ||||| || || ||||| |||||||| | || || || | | ||| ||| Sbjct 948889 CGACCGTCTTCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCT 948948 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| || || ||||| | || | | | ||||||| || ||||||||| Sbjct 948949 TCCTTGTCTTGGATCTTAGCCTTGACGTTTTCGATGGTATCTGAACCTTCAACTTCAAGA 949008 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || | |||||| ||||||| |||||| || Sbjct 949009 GTGATGGTCTTTCCTGTTAAAGTCTTAACGAAGATCTGCATGTT 949052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820430416775