Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5 107 1e-18 seq21 105 5e-18 seq2 104 2e-17 seq24 95.1 9e-15 >seq5 Length=4166812 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||||||||||||||| |||| ||| || |||| || || ||||| |||||||| Sbjct 207575 CTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAA 207516 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| || || || | || | ||||||||| || ||||| ||| | | Sbjct 207515 GATAAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTT 207456 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || ||||||| || ||||| | ||||| ||||| || ||||| || || || Sbjct 207455 TTCGATAGTGTCGGAACCCTCTACCTCTAAGGTAATGGTCTTACCTGTGAGTGTTTTAAC 207396 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 207395 GAAGATCTGCAT 207384 >seq21 Length=1919465 Score = 105 bits (116), Expect = 5e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || || || || ||| |||||||||||||||||| |||| ||||| || |||| | Sbjct 1444869 ACAAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCT-GC-CGTCTT 1444812 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | | || || ||||||||||| | ||| || ||||| | || | ||||||||| || Sbjct 1444811 CTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 1444752 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | || | |||||||| | ||| || || | || || |||| Sbjct 1444751 GAATCTTGGTCTTGACGTTTTCAATGGTGTCCGAACCTTCGACTTCGAGGGTGATGGTCT 1444692 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| || ||||||||||| Sbjct 1444691 TACCAGTGAGGGTCTTGACAAAGATTTGCAT 1444661 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||| ||||||| || || |||| || | || || || |||||| Sbjct 1352342 TCCTTTTGGATGTTATAATCGGAAAGAGTACGTCCGTCTTCTAATTGTTTACCTGCAAAG 1352283 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || || | || ||||| | || | ||||||||| || ||||| ||| | || Sbjct 1352282 ATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTT 1352223 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||||| ||| || || | || || ||||| || ||||||||||| || Sbjct 1352222 TCGATAGTGTCGGATCCTTCGACTTCGAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACA 1352163 Query 44327 AAGATTTGCAT 44337 ||||||||||| Sbjct 1352162 AAGATTTGCAT 1352152 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186 || || || || ||| |||||||||||||||||| |||| ||||| || |||| | Sbjct 1445325 ACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCT-GC-CGTCTT 1445268 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||| || |||||||| | ||| || ||||| | || | ||||||||| || Sbjct 1445267 CGAGCTGCTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTT 1445208 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| || | || | |||||||| | || || || | || || |||| Sbjct 1445207 GGATCTTGGTTTTGACATTTTCAATGGTGTCAGATCCCTCGACTTCAAGAGTGATGGTCT 1445148 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | ||||| || ||||||||||| Sbjct 1445147 TACCAGTTAATGTCTTTACAAAGATTTGCAT 1445117 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||||| ||||| || |||| | ||| | |||| || | || || ||||||| Sbjct 1352570 TCCTTTTGAATGTTATAGTCGGACAAAGTT--CTTCCGTCTTCTAATTGTTTACCGGCAA 1352513 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 | || | ||| || ||||| | || | ||||||||| || ||||| ||| | Sbjct 1352512 AAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTTGGCCTTTACGT 1352453 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | ||||| |||| |||||| |||| || || || || || ||||||||||| | Sbjct 1352452 TTTCAATGGTATCGGATCCTTCCACTTCCAAAGTGATAGTTTTACCAGTGAGGGTCTTGA 1352393 Query 44325 CGAAGATTTGCAT 44337 |||| |||||||| Sbjct 1352392 CGAAAATTTGCAT 1352380 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || || || || ||| |||||||| ||||||||||| | | | | || |||| || Sbjct 1444413 ACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGC-CGTCTTC 1444355 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || |||||||| || | ||| || ||||| | || | ||||||||| || Sbjct 1444354 CAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTG 1444295 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||| | ||| ||||||| ||||| ||||| Sbjct 1444294 GATCTTGGTCTTGACATTTTCAATAGTGTCAGAACCTTCAACCTCCAAGGTAATGGTCTT 1444235 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 || || | || || || || ||||||||||| || Sbjct 1444234 ACCAGTTAAAGTTTTTACAAAAATTTGCATGATTTG 1444199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || || || || ||| |||||||| ||||||||||| | | | | || |||| || Sbjct 1445097 ACGAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCCGACAAAGTTCTGC-CGTCTTC 1445039 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || |||||||| || | ||| || ||||| | || | ||||||||| || Sbjct 1445038 CAATTGTTTACCGGCAAAAATGAGACGTTGTTGATCAGGTGGAATACCTTCCTTGTCTTG 1444979 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| | || || || | || || ||||| Sbjct 1444978 AATCTTGGTCTTGACATTCTCAATGGTGTCAGATCCCTCAACTTCAAGAGTGATGGTCTT 1444919 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| || ||||||||||| Sbjct 1444918 ACCAGTGAGGGTCTTTACAAAGATTTGCAT 1444889 >seq2 Length=1770755 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||||||||| | ||| || |||| || || ||||| ||||||||| Sbjct 948859 TCCTTTTGGATGTTGTAATCCGAGAGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAAG 948918 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| || ||||| | || | ||||||||| || ||||| ||| | || Sbjct 948919 ATAAGACGTTGTTGATCGGGTGGGATACCTTCCTTGTCTTGGATCTTAGCCTTGACGTTT 948978 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| || | ||| || || | || || |||||||| || | ||||| ||| Sbjct 948979 TCGATGGTATCTGAACCTTCAACTTCAAGAGTGATGGTCTTTCCTGTTAAAGTCTTAACG 949038 Query 44327 AAGATTTGCATG 44338 ||||| |||||| Sbjct 949039 AAGATCTGCATG 949050 >seq24 Length=3408800 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||||||||||||||||||| ||||| || |||| || | || || ||||||| Sbjct 192447 TCCTTTTGGATGTTGTAATCGGAAAGAGTT--CGGCCGTCTTCTAATTGTTTACCGGCAA 192504 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||| | ||| || ||||| | || | ||||||||| || ||||| ||| | Sbjct 192505 AGATGAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTGAATCTTGGTCTTGACAT 192564 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | ||| || |||| || || ||||| || || | ||||| | Sbjct 192565 TTTCGATAGTGTCAGAACCTTCGACTTCCAAGGTGATGGTCTTGCCGGTCAATGTCTTGA 192624 Query 44325 CGAAGATTTGCAT 44337 | ||||||||||| Sbjct 192625 CAAAGATTTGCAT 192637 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || || || || ||| ||||||||||||||||| || | | | | || |||| || Sbjct 192657 ACGAGATGGAGAGTGGATTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGC-CGTCTTC 192715 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 | || || ||||||||||| | ||| || ||||| | || | ||||||||| || Sbjct 192716 TAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTTG 192775 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||||| ||| || || | || || ||||| Sbjct 192776 AATCTTGGTCTTGACATTTTCGATAGTGTCGGATCCTTCGACTTCGAGGGTGATGGTCTT 192835 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| || || |||||||| Sbjct 192836 ACCAGTGAGGGTCTTGACAAAAATTTGCAT 192865 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCGT 44186 || || || || ||| |||||||| ||||||||||| |||| || || | || | Sbjct 191972 ACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATC--CGAGAGGGTTCTGCCATCCT 192029 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | | || || ||||||||||| | ||| || ||||| | || | ||||||||| || Sbjct 192030 CTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCAGGTGGGATACCTTCCTTGTCTT 192089 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | || | |||||||||| ||| || || | || || |||| Sbjct 192090 GAATCTTGGTCTTAACGTTTTCAATGGTGTCGGATCCTTCGACTTCAAGAGTGATGGTCT 192149 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | ||||| || ||||| ||||| Sbjct 192150 TACCAGTCAATGTCTTGACAAAGATCTGCAT 192180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990290315425