Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq21 165 2e-35 seq24 156 1e-32 >seq21 Length=1919465 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || || ||||||||||| || ||| | || ||| Sbjct 1444664 CAAATCTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGTTCGGAC 1444723 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||| ||||| ||||| || || || || || ||| Sbjct 1444724 ACCATTGAAAACGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAACAA 1444783 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||| ||||| | ||||| || || |||||| |||| || ||| || Sbjct 1444784 CGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTCTTTCCGACTACAACATC 1444843 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || |||||||| Sbjct 1444844 CAAAAGGAGTCCACTCTCCATCTTGT 1444869 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| || || || ||||||||||| || ||| | || ||| Sbjct 1352155 CAAATCTTTGTCAAGACCCTCACTGGCAAGACAATCACCCTCGAAGTCGAAGGATCCGAC 1352214 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| || ||||| ||||| || || || || || ||| Sbjct 1352215 ACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAA 1352274 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| | ||||| ||| | |||||| ||||||||||| || Sbjct 1352275 AGATTAATCTTTGCAGGTAAACAATTAGAAGACGGACGTACTCTTTCCGATTATAACATC 1352334 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| |||||||| || ||||| || Sbjct 1352335 CAAAAGGAATCAACTCTCCATCTCGT 1352360 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || ||||| || ||||| ||||| | || |||||| | || || Sbjct 1352383 CAAATTTTCGTCAAGACCCTCACTGGTAAAACTATCACTTTGGAAGTGGAAGGATCCGAT 1352442 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||||| ||||| ||||| || || || || || ||| Sbjct 1352443 ACCATTGAAAACGTAAAGGCCAAGATTCAAGACAAGGAAGGTATTCCACCTGATCAACAA 1352502 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||| ||||| | ||||| ||||| ||| | |||| |||||| | Sbjct 1352503 CGTCTCATTTTTGCCGGTAAACAATTAGAAGACGGAAGAACTTTGTCCGACTATAACATT 1352562 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| |||||||| || ||||| || Sbjct 1352563 CAAAAGGAATCAACTCTCCATCTCGT 1352588 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || ||||| || || || || | || ||| Sbjct 1445120 CAAATCTTTGTAAAGACATTAACTGGTAAGACCATCACTCTTGAAGTCGAGGGATCTGAC 1445179 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| ||||| || ||||| ||||| || || || || || ||| Sbjct 1445180 ACCATTGAAAATGTCAAAACCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAA 1445239 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| ||||||||||| || || |||||| |||| || ||| || Sbjct 1445240 CGTCTTATCTTTGCTGGAAAGCAGCTCGAAGACGGCAGAACTCTTTCCGACTACAACATC 1445299 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || ||||| || Sbjct 1445300 CAAAAGGAGTCCACTCTCCATCTCGT 1445325 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || ||||| || || || || | || ||| Sbjct 1444436 CAAATCTTTGTCAAGACATTGACCGGCAAGACCATCACTCTTGAAGTCGAGGGATCTGAC 1444495 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| ||||| ||||| || ||||| |||||||| || || || || ||| Sbjct 1444496 ACTATCGAGAATGTCAAGACCAAGATCCAAGACAAGGAAGGAATTCCACCTGATCAACAA 1444555 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||||||||| || || ||| | | ||||| ||| | Sbjct 1444556 CGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGCAGAACTTTGTCGGATTACAACATT 1444615 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || |||||||| Sbjct 1444616 CAAAAGGAATCCACTCTCCATCTTGT 1444641 >seq24 Length=3408800 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || || ||||| || || || ||||||||||| || ||| | || ||| Sbjct 192862 CAAATTTTTGTCAAGACCCTCACTGGTAAGACCATCACCCTCGAAGTCGAAGGATCCGAC 192803 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| |||||||| ||||| ||||| ||||| || || || ||| Sbjct 192802 ACTATCGAAAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATCCCACCTGATCAACAA 192743 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||| ||||| | ||||| || || ||| | | || || ||| || Sbjct 192742 CGTCTTATCTTTGCCGGTAAACAATTAGAAGACGGCAGAACTTTGTCGGACTACAACATC 192683 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || || ||||| || Sbjct 192682 CAAAAGGAATCCACTCTCCATCTCGT 192657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730814429850