Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20fasciculatum_20[genbank_20GCA_5F000203815.1_202011- 04-13] 25 sequences; 31,019,208 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 >seq5 Length=4166812 Score = 107 bits (118), Expect = 2e-18 Identities = 165/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41631 CACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGT 41690 |||| || || || ||||| | || ||||| || || |||||| || ||||| |||| Sbjct 207615 CACCACCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAGT 207556 Query 41691 CGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750 |||||||||| || |||| ||||| ||||| ||||| || || || || |||||||| | Sbjct 207555 CGGAGAGGGTACGACCGTCTTCGAGTTGCTTACCGGCAAAGATAAGACGTTGTTGGTCAG 207496 Query 41751 CGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGAC 41809 || | | ||||||| | || | || || | ||| | | ||||||| | Sbjct 207495 GTGGGATACCTTCCTTGT-CTTGGATCTTAGCCTTGACGTTTTCGATAGTGTCGGAACCC 207437 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| | || || || ||||| || || || || ||||| |||||||| Sbjct 207436 TCTACCTCTAAGGTAATGGTCTTACCTGTGAGTGTTTTAACGAAGATCTGCAT 207384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303855530000