Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq103 123 5e-23 seq84 109 1e-18 seq21 109 1e-18 seq245 107 4e-18 seq83 107 4e-18 seq36 107 4e-18 seq17 107 4e-18 seq10 107 4e-18 >seq103 Length=128160 Score = 123 bits (136), Expect = 5e-23 Identities = 256/376 (68%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148 ||||| ||||| |||||| | ||||| ||||||||||| || || ||| |||| | ||| Sbjct 27765 CAAGCTTCAACCTCTGAATTATATGGTAAAGTTCAAGAGATCCCACAATCAGAGACTACT 27706 Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGATTTGTA-A 61207 || || ||||| ||| || || | ||||||||||| ||| || || |||| ||||| Sbjct 27705 CCATTCTATCCACGTTCACCATACGCTGTTGCAAAACAATATGCATATTGGA-TTGTAGT 27647 Query 61208 AAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCACGAGAG 61267 ||| || || || | || | || | | |||||| |||| |||||||| ||| Sbjct 27646 AAACTATCGTGAAGCATACGATATCTACGCATGTAATGGTATTTTATTCAATCATGAGTC 27587 Query 61268 TCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATATTTT 61327 || |||||||| ||||| ||| | || || || ||||| |||| Sbjct 27586 ACCACGTAGAGGTCCAACCTTTGTAACTAGAAAGATCACCCGTTTCGTTGCTGGTATTGC 27527 Query 61328 TAACGGTGTCGA-AAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGGGGAT 61386 ||| || |||| | | || | || || || | | ||| | |||||||| Sbjct 27526 ATGTGGTAAAGATGAAATAC-TCTACTTGGGTAATATCAATGCCAAACGTGATTGGGGCC 27468 Query 61387 ATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCAGATGACT 61446 |||| |||||| |||| || |||||||| ||||| |||||||| | ||||| || | Sbjct 27467 ATGCTAGAGATTACGTCGAAGCAATGTGGTTAATGTTACAACAAGAGAAACCAGAGGATT 27408 Query 61447 ACGTTATTGCGACTGG 61462 ||| || || ||||| Sbjct 27407 TCGTCATCGCCACTGG 27392 >seq84 Length=146601 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 78154 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 78213 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 78214 CCCCCCGTTGGGC 78226 >seq21 Length=320491 Score = 109 bits (120), Expect = 1e-18 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct 219299 TGCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAG 219240 Query 165769 CCCCACGATGGGC 165781 |||| || ||||| Sbjct 219239 CCCCCCGTTGGGC 219227 >seq245 Length=24622 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 23611 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 23670 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 23671 CCCCCGTTGGGC 23682 >seq83 Length=51947 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 35816 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 35875 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 35876 CCCCCGTTGGGC 35887 >seq36 Length=221538 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 185726 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 185667 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 185666 CCCCCGTTGGGC 185655 >seq17 Length=343861 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 327097 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 327038 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 327037 CCCCCGTTGGGC 327026 >seq10 Length=392337 Score = 107 bits (118), Expect = 4e-18 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 180887 GCCCGGCTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGGGGGTTCGAGC 180946 Query 165770 CCCACGATGGGC 165781 ||| || ||||| Sbjct 180947 CCCCCGTTGGGC 180958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810487290110