Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq224 116 3e-21 seq64 116 3e-21 seq175 111 1e-19 seq62 107 2e-18 seq160 89.7 4e-13 >seq224 Length=37943 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || ||||||| || || ||||||||||| |||||||| Sbjct 19489 TACCACCTCTTAATCTTAAGACTAAGTGGAGAGTTGATTCTTTTTGAATATTGTAATCAG 19548 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || ||| | || ||||| || ||||| || | Sbjct 19549 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTG 19608 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| |||||| | ||| | | | || | | || | Sbjct 19609 GGATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGTTATCACTACCTTCAA 19668 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || ||||||| |||||| |||||||| ||||| Sbjct 19669 CCTCAAGAGTAATGGTCTTACCGGTCAAAGTTTTAACAAAAATTTGCAT 19717 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || ||||||| || || ||||||||||| |||||||| Sbjct 19945 TACCACCTCTTAATCTTAAGACTAAGTGGAGAGTTGATTCTTTTTGAATATTGTAATCAG 20004 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || || || | ||||| || || | || ||||| || ||||| || | Sbjct 20005 AAAGAGTACGACCGTCTTCTAATTGTTTACCGGCAAAAATAAGACGTTGTTGATCTGGTG 20064 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| |||||| | ||| | | | || | | || | Sbjct 20065 GAATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGTTATCAGAACCTTCAA 20124 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTATT 118746 | || | ||| | ||||| || || | ||||| |||||||| ||||| ||| ||| Sbjct 20125 CTTCTAAGGTAATAGTTTTACCAGTTAATGTTTTAACAAAAATTTGCATTGCTAATT 20181 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || ||||||| || || ||||||||||| |||||||| Sbjct 19261 TACCACCTCTTAATCTTAAGACTAAGTGGAGAGTTGATTCTTTTTGAATATTGTAATCAG 19320 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || || || | ||||| || ||| | || ||||| || ||||| || | Sbjct 19321 AAAGAGTACGACCGTCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTG 19380 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| ||||| | ||| | | | || | | || | Sbjct 19381 GGATACCTTCTTTGTCTTGGATTTTGGCCTTAACATTTTCAATGTTATCACTACCTTCAA 19440 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || | ||||||||||| || ||||| Sbjct 19441 CTTCTAAAGTGATGGTTTTACCAGTTAAGGTTTTTACAAAGATTTGCAT 19489 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||| || ||||||| || || ||||||||||| |||||||| Sbjct 19033 TACCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTGAATATTGTAATCAG 19092 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || || || | ||||| |||||| | || | | || || || || | Sbjct 19093 AAAGAGTACGACCGTCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTG 19152 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||||| ||| || | ||| | | | || | | || | Sbjct 19153 GGATACCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCAATGTTATCGCTACCTTCAA 19212 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || | ||||| ||||| || ||||| Sbjct 19213 CTTCTAATGTGATTGTTTTACCAGTTAAGGTTTTGACAAAGATTTGCAT 19261 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||| || ||||||| || || ||||||||||| |||||||| Sbjct 19717 TACCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTGAATATTGTAATCAG 19776 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| ||||| | || | | || || || || | Sbjct 19777 AGAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTG 19836 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||| || ||||| | ||| | | | || | | || | Sbjct 19837 GGATACCTTCTTTGTCTTGAATCTTGGCCTTAACATTTTCAATGTTATCTGAACCTTCAA 19896 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || | ||||||||||| || ||||| Sbjct 19897 CTTCTAATGTGATGGTTTTACCAGTTAAGGTTTTTACAAAGATTTGCAT 19945 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || | ||||||||| || ||||||| || || ||||||||||| || ||||| Sbjct 18806 ACCACCTCTTAATCTCAAGACTAAGTGGAGAGTTGATTCTTTTTGAATATTATAATCAGA 18865 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | ||| || ||| || | ||||| ||||| | || | | || || || || || Sbjct 18866 AAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGGTCTGGTGG 18925 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || || |||||| ||| || |||||| | ||| | | | || | | || || Sbjct 18926 GATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTTTCAATGTTATCTGAACCTTCAAC 18985 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||| || || | ||||| |||||||| ||||| Sbjct 18986 TTCTAATGTGATGGTTTTACCAGTTAAGGTTTTGACAAAAATTTGCAT 19033 >seq64 Length=175976 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || || || | || || ||||||||||| || ||||| Sbjct 77770 TACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTG 77829 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||| | ||||| ||||| | || ||||| || || || || | Sbjct 77830 AGAGAGTACGACCATCCTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTG 77889 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| || ||| ||| ||| ||| || | ||| | | |||| | | || | Sbjct 77890 GGATACCCTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATGTTGTCAGAACCTTCTA 77949 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| | ||||| ||||||| |||||||||||||| ||||| Sbjct 77950 CTTCGAGGGTAATGGTTTTACCGGTCAAGGTTTTTACAAAAATTTGCAT 77998 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||| | || ||||||| || || ||||||||||| || ||||| Sbjct 77542 TACCACCTCTCAATCTAAGTACTAAGTGGAGAGTTGATTCTTTTTGAATATTATAATCTG 77601 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| |||||| | || | | || ||||| || | Sbjct 77602 AGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTG 77661 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| || ||| ||||| ||| || | ||| | | | || | | ||| | Sbjct 77662 GGATACCCTCTTTATCTTGGATTTTGGCTTTTACATTTTCAATGTTATCAGAACCCTCTA 77721 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| || | ||||| ||||| | ||||||||||||||| ||||| Sbjct 77722 CTTCGAGTGTGATTGTTTTACCGGTTAAAGTTTTTACAAAAATTTGCAT 77770 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || || || | || || ||||||||||| || ||||| Sbjct 77998 TACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTG 78057 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||| | ||||| |||||| | || | | || ||||| || | Sbjct 78058 AGAGAGTACGACCATCCTCTAATTGTTTGCCAGCGAAAATTAATCTTTGTTGATCTGGTG 78117 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||| || ||| ||||| ||| || | ||| | | | || | | || | Sbjct 78118 GGATACCCTCTTTATCTTGGATTTTGGCTTTTACATTTTCAATGTTATCAGAACCTTCTA 78177 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| || | ||||| ||||||| |||||||||||||| ||||| Sbjct 78178 CTTCGAGTGTGATTGTTTTACCGGTCAAGGTTTTTACAAAAATTTGCAT 78226 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || || || | || || ||||||||||| || ||||| Sbjct 78226 TACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTG 78285 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||| | ||||| ||||| | || ||||| || || || || | Sbjct 78286 AGAGAGTACGACCATCCTCTAATTGTTTGCCAGCAAAAATAAGACGTTGTTGGTCTGGTG 78345 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||| ||| ||| || | ||| | | |||| | | || | Sbjct 78346 GGATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATGTTGTCAGAACCTTCTA 78405 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| || | ||||| || || |||||||| || ||||| ||||| Sbjct 78406 CTTCGAGAGTAATGGTTTTACCTGTGAGAGTTTTAACGAAAATTTGCAT 78454 >seq175 Length=69793 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | ||||| |||| || ||||| ||||||||||||||||| Sbjct 6006 TACCACCTCTTAATCTGAGTACCAAATGGAGAGTGGACTCCTTTTGAATGTTGTAATCAG 6065 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| |||||| | || ||||| || || || || | Sbjct 6066 AAAGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTG 6125 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| |||||| ||| || | ||| | |||| | | || | Sbjct 6126 GAATACCTTCCTTGTCTTGAATTTTGGTTTTTACATTTTCAATATTGTCAGAACCTTCTA 6185 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || |||||||| ||||| || ||||| Sbjct 6186 CTTCTAAAGTAATGGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 6234 >seq62 Length=176758 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || |||| || || ||||||||||||||||| || Sbjct 76811 TACCACCTCTTAATCTAAGAACTAAATGGAGGGTGGATTCTTTTTGAATGTTGTAGTCAG 76752 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || ||| | || ||||| || ||||| || | Sbjct 76751 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTG 76692 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| || |||||| ||||| |||||| | |||| | | || | | || | Sbjct 76691 GAATGCCTTCTTTGTCTTGGATTTTGGCTTTAACATTCTCGATGTTATCAGAACCTTCAA 76632 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || |||||||| |||||||| ||||| Sbjct 76631 CTTCCAATGTGATTGTTTTACCAGTGAGAGTTTTAACAAAAATTTGCAT 76583 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | || || |||| || ||||||||||||||||||||||| Sbjct 77039 TACCACCACGAAGTCTAAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTGTAATCAG 76980 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || || || | ||||| || ||| | || ||||| || ||||| || | Sbjct 76979 AGAGAGTACGACCGTCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTG 76920 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||||| ||| || | |||| | | || | | || | Sbjct 76919 GAATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCGATGTTATCGGAACCTTCAA 76860 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || || || || || ||||| |||||||| ||||| Sbjct 76859 CTTCTAATGTGATGGTCTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 76811 >seq160 Length=80418 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| || || || || | || || |||||||||||||| || || Sbjct 3532 TACCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCTG 3473 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| ||||| | || | | || ||||| || | Sbjct 3472 ATAAAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTG 3413 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||||||| |||||| | ||| | | | || | || || | Sbjct 3412 GAATACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATGTTATCAGAGCCTTCAA 3353 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| || | ||||| || || || ||||| || ||||| ||||| Sbjct 3352 CTTCGAGAGTAATGGTTTTACCAGTTAGTGTTTTAACGAAAATTTGCAT 3304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433825128553924