Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq57 170 3e-37 >seq57 Length=183543 Score = 170 bits (188), Expect = 3e-37 Identities = 1137/1815 (63%), Gaps = 68/1815 (4%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| | | ||| || || ||||| ||||||||||| || || |||| | Sbjct 134217 GTGAATTGAATTGCATCGGCAGCTGGACGAGTACGAAGATAGTACATACCAGTCTTTAAA 134276 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || |||| ||| |||||||| || ||||| | | | | || || || || Sbjct 134277 CCCTTCTTCCAAGAGTAGAAATGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCAGCGATG 134336 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 | ||| | | |||||||||||||||||| || || | || |||||||| | ||| Sbjct 134337 AAAACATTGAAACTTTGACTTTGATCGATGAAAGCACCACGATCAGCAGCCATATCAATG 134396 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 | || |||| |||||||||| | ||||| || | | || | || ||||||| Sbjct 134397 AGAGTTCTTTGACGAATTTCCCATACGGTTTTGTAGAGTTCTTTCAATTCATCTGGAATA 134456 Query 65079 TTTGTATTC---TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 | || || || || |||| | || || || |||||| ||||| || Sbjct 134457 CCACCAATCGATTGGATTGAACCACGTGCAGCGATGATTTGATTCTTCATCTCTGGTGTC 134516 Query 65136 CATAATTTTCT-CTCGGTTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 65193 || ||| | ||| | | | | || || | || || || | | ||||| | Sbjct 134517 CA-AATGCCCAACTCCATGAGATCCTCCAACAAT-TGTTTGTTGACAATTGTGAATTCAC 134574 Query 65194 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 65253 ||| ||| || | ||| ||||||| || || || ||||| | | |||||||| | Sbjct 134575 CAGCCAAGACACGACGACTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTCATTATTAC 134634 Query 65254 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 65313 | | |||||| |||||| || || ||||| ||||| | ||||| ||| | |||| Sbjct 134635 CAAGGATTTGACTAGTTGAAGCGGTTGGCATTGGTGCGATCAATAGTGAATTACGTAGAC 134694 Query 65314 CGTATGTTCTGA---TTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 65370 | | | ||| | ||||| |||| |||||||||||| | ||| || Sbjct 134695 CACCTTTATTGACGATCTTATCCTTTAATTCGTCCCAATTCCAACGTGAACTTGGTGTAA 134754 Query 65371 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 65430 | ||| |||||||| || || || ||| | | || | Sbjct 134755 CATTCCACATATCAAATTGGAGAATACCTTTGGATGCTGGGGAACCTTGGAAACTCTCAT 134814 Query 65431 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 65490 ||| || || | |||| |||| | || ||| || || |||||||||||| Sbjct 134815 ATGTGCCATCACGTACTGCTAATTCATGAGAAGCTGTTAAAGCGGCGAAATAAATGGTTT 134874 Query 65491 CGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGG-ATA---ATTTAA 65545 | ||| | ||| | || | | ||| | | ||||| ||||| ||| |||| Sbjct 134875 CAGCGATTTCAACATTCA-ATTTAGATGCAGCAACACTATCGAATGGCATACGCATTT-- 134931 Query 65546 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 65605 |||| || | || || || ||||||| |||||||||||| || | |||||| ||| Sbjct 134932 --GAATGAAAACATCGGCCAAACCTTGAATACCAATACCGATTGGACGATGTCTGAGATT 134989 Query 65606 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC- 65664 || ||| || ||| || ||||||| | ||| ||| ||||| ||||||||| Sbjct 134990 CGAAGTTTTTGCCTCTACAACAGGATAAAAGTTACGATCGATAATAACGTTGAGATTTAC 135049 Query 65665 --TGA-CAA-----TTA-CT----------TTGA----CCACATCCTTCAGTTTGAGAAA 65701 ||| ||| ||| || |||| | | |||||| ||| || Sbjct 135050 AGTGATCAACTTGGTTATCTCAAAGAGGAATTGATGATCGAATTCCTTCTCTTTTGGATC 135109 Query 65702 ATCAAATCGCTCATCTATTACAAAC--ATGTTCAA--TGCAACAGATGCCAGATTACAAA 65757 | | || | | | || || || || | ||||| ||| || |||||||| | Sbjct 135110 TGTGGAGC-CTGGTTTTTGACGAATGAATTTTGGAAGTGCAATAGAGGCAAGATTACATA 135168 Query 65758 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 65817 | || | |||| || | ||||| || |||||||| ||||||||||| | ||| Sbjct 135169 CAGCAATTTCATCAGGTGATGTGTATTGAATGATCTCAGTACAAAGATTACTGCTACTGA 135228 Query 65818 TGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 65877 |||| || | ||| | |||||| || || || ||||||||||| | ||||||| Sbjct 135229 TGGTACCGAGATTCTTTTGATTGGATTTAGCATTGCAAGCATCCTTATACAATATGAATG 135288 Query 65878 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 65937 | ||||||||||||| || || || ||||| || ||| | || | ||||| |||| Sbjct 135289 GTGTACCAGTTTCAACTTGTGACTCCATAATTGCAAACCAAAGTTCTTGTGCCTTAATTA 135348 Query 65938 TAGAT-TTGTA---TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCT 65993 | | ||| | ||| | | ||| ||| | || | | | | || || Sbjct 135349 CACGTCTTGGAAGATCTGGTGTTGCTTC---ATATTTTA---AGTAGAGGGCACGATGCT 135402 Query 65994 CCCCAAACATTGTCCAAT-----CCAGGACATTCATCCGGACACATCAACGACCACTCTC 66048 || || | ||| | || || |||| ||||| | | | ||| || | Sbjct 135403 CCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTCATTTGGACAAAAGAGTGCCCAATCAC 135462 Query 66049 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTC 66108 | | | | || |||| |||||||| |||| | ||| ||||| || | |||| Sbjct 135463 CATTTTGTTCAACACGTTCCATAAAGATATCACTGACCCAGAGAGCGTAGAAGAGGTCTC 135522 Query 66109 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAT 66168 | | ||| || || || || || || || || ||||| | ||| | | | ||| Sbjct 135523 TTGCTCTCATCTCTTCTTTACCAGTGTTTTTCTTGAGATCAATAAACTCAAATACATCGG 135582 Query 66169 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 66228 |||||| || || ||||| | ||| | | || | || || || || || | Sbjct 135583 CATGCCATGGCTCTAAGTAGACGGCAAAGGCACCTTTTCTCTTACCACCACCTTGGTCAA 135642 Query 66229 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCAT 66288 || | || || | ||| |||| | | |||||| | | ||| ||| ||||||| Sbjct 135643 CATAACGTGCAGTATCATTGAAAACACGAAGCATTGGTACCAAACCGTTGCTAGTACCAT 135702 Query 66289 TGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCC 66348 |||| || ||||| ||| | |||||||| || | | | ||| || || | Sbjct 135703 TGGTACCACGAATATAACTTTGAGCGGCACGAATCTTGTGGACGGCAATACCAATACCAC 135762 Query 66349 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 66408 | || |||| ||||||||||| ||| ||||||| ||||| ||||| || ||||| | Sbjct 135763 CAGCACTTTTTGAGATTAATGCACATTGTTTTAAGGTATCGTAGATACCATCTATTGAGT 135822 Query 66409 CATCCATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACGACTAGTTCCCGCATT 66466 | ||| |||| | || | ||||| || |||| | |||||| | || || ||||| Sbjct 135823 CCTCCTTCATTTGAACCAAGAAACAACTTGACATCTGTGGTGATG--GTGTACCTGCATT 135880 Query 66467 AAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT 66526 || ||||| |||| ||| || || ||| |||| | ||| || | ||||| || | ||| Sbjct 135881 GAACAAGGTTGGAGTAGCATGGGTGAACAATTTCTGAGAGAGATGTTTGTAGGTGTTAAT 135940 Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 || || || || ||| || ||||| | ||||||||| ||||| || || || Sbjct 135941 GGCACTATCGATGTCTTCACCATGGATACCTACAGAGACACGCATCAACATATGTTGTGG 136000 Query 66587 TCTTTCAACGATCTT 66601 | ||| || || || Sbjct 136001 ACGTTCCACAATTTT 136015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164597521480