Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq57 221 2e-52 >seq57 Length=183543 Score = 221 bits (244), Expect = 2e-52 Identities = 1153/1824 (63%), Gaps = 86/1824 (5%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| | | ||| || || ||||| ||||||||||| || || |||| | Sbjct 134217 GTGAATTGAATTGCATCGGCAGCTGGACGAGTACGAAGATAGTACATACCAGTCTTTAAA 134276 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || |||| |||||||||||| || ||||| | | | | || || || || Sbjct 134277 CCCTTCTTCCAAGAGTAGAAATGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCAGCGATG 134336 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 | ||| | | |||||||||||||||||| || || | || |||||||| | ||| Sbjct 134337 AAAACATTGAAACTTTGACTTTGATCGATGAAAGCACCACGATCAGCAGCCATATCAATG 134396 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 | || |||| |||||||||| | ||||| || | | || | || ||||||| Sbjct 134397 AGAGTTCTTTGACGAATTTCCCATACGGTTTTGTAGAGTTCTTTCAATTCATCTGGAATA 134456 Query 78958 TTTGTATTC---TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 | || || || || |||| | || || || |||||| |||||| || Sbjct 134457 CCACCAATCGATTGGATTGAACCACGTGCAGCGATGATTTGATTCTTCATCTCTGGTGTC 134516 Query 79015 CATAATTTTCT-CTCGGTTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 79072 || ||| | ||| | | | | || || | || || || | | ||||| | Sbjct 134517 CA-AATGCCCAACTCCATGAGATCCTCCAACAAT-TGTTTGTTGACAATTGTGAATTCAC 134574 Query 79073 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTC 79132 ||| ||| || | ||| ||||||| || || |||||||| | |||||||||| | Sbjct 134575 CAGCCAAGACACGACGACTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTCATTATTAC 134634 Query 79133 CCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 79192 | | |||||| |||||| || |||||||| ||||| | ||||| ||| | |||| Sbjct 134635 CAAGGATTTGACTAGTTGAAGCGGTTGGCATTGGTGCGATCAATAGTGAATTACGTAGAC 134694 Query 79193 CG----TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACA 79248 | ||| | ||| ||||| |||| ||||||| |||| | | || | Sbjct 134695 CACCTTTATTGAC-GATCTTATCCTTTAATTCGTCCCAATTCCAACGTGAACTTGGTGTA 134753 Query 79249 ACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCA 79308 |||||||| | |||| |||| |||||||| || || || ||| | | | ||| Sbjct 134754 ACATTCCACATATCAAATTGGAGAATACCTTTGGATGCTGGGGAACCTTGGAAACTCTCA 134813 Query 79309 TAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTT 79368 || | || || | | ||||||||| | || ||| || || ||||||||||| Sbjct 134814 TATGTGCCATCACGTACTGCTAATTCATGAGAAGCTGTTAAAGCGGCGAAATAAATGGTT 134873 Query 79369 TCGAAAATCTTCTTATTGAGATCTTG-TGCTTCTAGGCTATCAAATGG-ATA---ATTTA 79423 || || | ||| | || | | ||| | | ||||| ||||| ||| |||| Sbjct 134874 TCAGCGATTTCAACATTCA-ATTTAGATGCAGCAACACTATCGAATGGCATACGCATTT- 134931 Query 79424 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 79483 |||| || | || || || ||||||| |||||||||||| || | |||||| || Sbjct 134932 ---GAATGAAAACATCGGCCAAACCTTGAATACCAATACCGATTGGACGATGTCTGAGAT 134988 Query 79484 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC 79543 | ||| ||| || ||| || ||||||| | ||| ||| ||||| ||||||| Sbjct 134989 TCGAAGTTTTTGCCTCTACAACAGGATAAAAGTTACGATCGATAATAACGTTGAGAT--- 135045 Query 79544 TGACTATTACTTTGACCACATCCTTTAGTTT---GAGAAAATCAA-ATCG---TCCATCT 79596 |||| ||| || | ||| | ||| || | | |||| ||| ||| Sbjct 135046 ------TTACAGTGATCAACTTGGTTATCTCAAAGAGGAATTGATGATCGAATTCCTTCT 135099 Query 79597 ATT-------------------------ACAAAC--ATGTTCAACGCG--ACAGATGCCA 79627 || || || || || | | | | ||| || | Sbjct 135100 CTTTTGGATCTGTGGAGCCTGGTTTTTGACGAATGAATTTTGGAAGTGCAATAGAGGCAA 135159 Query 79628 GATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTAC 79687 ||||||| || || | |||| || | ||||| || || ||||| || || |||| Sbjct 135160 GATTACATACAGCAATTTCATCAGGTGATGTGTATTGAATGATCTCAGTACAAAGATTAC 135219 Query 79688 TACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 79747 | | | ||||| || | ||| | |||||| || || || ||||||||||| | Sbjct 135220 TGCTACTGATGGTACCGAGATTCTTTTGATTGGATTTAGCATTGCAAGCATCCTTATACA 135279 Query 79748 GAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 79807 ||||| || ||||||||||||| || || || ||||| || ||| | || | | Sbjct 135280 ATATGAATGGTGTACCAGTTTCAACTTGTGACTCCATAATTGCAAACCAAAGTTCTTGTG 135339 Query 79808 CCTTTATTATA-GACTTGTA---TCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCG 79863 |||| |||| | | |||| | ||| | | ||| | |||| | || | | Sbjct 135340 CCTTAATTACACGTCTTGGAAGATCTGGTGTTGCTT-CATATTTTAAGTAGAGG-----G 135393 Query 79864 AACTCGTCTCCCCAAACATCGTCTAATCCAGGACA--TTCGTCA---GGACACATCAACG 79918 || |||| || | |||| | || | | | ||| ||||| | | | Sbjct 135394 CACGATGCTCCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTCATTTGGACAAAAGAGTG 135453 Query 79919 ACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 79978 ||| || |||| | | || |||| |||||||| |||| | ||| ||||| | Sbjct 135454 CCCAATCACCATTTTGTTCAACACGTTCCATAAAGATATCACTGACCCAGAGAGCGTAGA 135513 Query 79979 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 80038 | || ||||| | ||| ||| || || || || || || || ||||| | ||| | | Sbjct 135514 AGAGGTCTCTTGCTCTCATCTCTTCTTTACCAGTGTTTTTCTTGAGATCAATAAACTCAA 135573 Query 80039 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTC 80098 | ||| | |||||| || || ||||| | ||| | | || || || || | Sbjct 135574 ATACATCGGCATGCCATGGCTCTAAGTAGACGGCAAAGGCACCTTTTCTCTTACCACCAC 135633 Query 80099 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 80158 | || || | || | || || | ||| |||| | | |||||| | | ||| ||| Sbjct 135634 CTTGGTCAACATAACGTGCAGTATCATTGAAAACACGAAGCATTGGTACCAAACCGTTGC 135693 Query 80159 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGAC 80218 ||||||||||| || ||||| ||| | ||||||||| || | | | || Sbjct 135694 TAGTACCATTGGTACCACGAATATAACTTTGAGCGGCACGAATCTTGTGGACGGCAATAC 135753 Query 80219 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCT 80278 | || || || || |||| ||||||||||| ||| ||||||| ||||| ||||| || | Sbjct 135754 CAATACCACCAGCACTTTTTGAGATTAATGCACATTGTTTTAAGGTATCGTAGATACCAT 135813 Query 80279 CTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACGACTAGT 80336 |||| || || |||| | || | ||||| || |||| | |||||| | || Sbjct 135814 CTATTGAGTCCTCCTTCATTTGAACCAAGAAACAACTTGACATCTGTGGTGATG--GTGT 135871 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 || ||||| || ||||| |||| ||| || || ||| |||| | ||| || | ||||| Sbjct 135872 ACCTGCATTGAACAAGGTTGGAGTAGCATGGGTGAACAATTTCTGAGAGAGATGTTTGTA 135931 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 || | ||| || || || || ||| || ||||| | ||||||||| ||||| Sbjct 135932 GGTGTTAATGGCACTATCGATGTCTTCACCATGGATACCTACAGAGACACGCATCAACAT 135991 Query 80457 GTGCTGAGGTCTTTCAACGATCTT 80480 || || || | ||| || || || Sbjct 135992 ATGTTGTGGACGTTCCACAATTTT 136015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718259848575080