Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq62 91.5 1e-13 >seq62 Length=176758 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 |||||||| || || ||| ||||||||||||||||||| | || |||| || Sbjct 77019 ACTAAATGGAGAGTTGACTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCGTCTTCT 76960 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | || |||||| || |||| | ||| || ||||| || | || ||| ||||| Sbjct 76959 AATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGG 76900 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| |||| | | | ||| |||||| | || || | ||| ||||| ||| Sbjct 76899 ATTTTGGCTTTGACATTCTCGATGTTATCGGAACCTTCAACTTCTAATGTGATGGTCTTA 76840 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT--CGTGTCTTGATCGAAGAA 48744 || ||||| ||||| |||||||| ||||| | |||| ||| ||||| Sbjct 76839 CCAGTGAGGGTTTTAACAAAAATTTGCATACCACCTCTTAATCTAAGAA 76791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246081402997