Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq139 113 5e-20 seq4 96.9 4e-15 >seq139 Length=97671 Score = 113 bits (124), Expect = 5e-20 Identities = 193/281 (69%), Gaps = 12/281 (4%) Strand=Plus/Minus Query 164721 ATTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT----GATA 164776 ||||||| ||||| |||| ||||| | ||||| |||| ||| |||||| || | Sbjct 11125 ATTACATATTATTATTTTCGATGAATTGGATGCAATTTGTAAATCTCGTGGTTCTAGACA 11066 Query 164777 ATATTATTCA--------TGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGT 164828 | | ||||| |||| |||| || ||||| ||| | | | || |||||||| Sbjct 11065 AGGTGATTCAGGTGTTGGTGATTCAGTTGTAAATCAATTGTTAGCAATGATTGATGGTGT 11006 Query 164829 AGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGA 164888 ||||| || |||||||||||| | | ||||||||||| || ||| | |||||||| Sbjct 11005 TGAATCATTGAATAATATTTTAGTCATTGGTATGACCAATAGAAAAGATATGATTGATGA 10946 Query 164889 TGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGA 164948 |||||| | || || ||||| || ||| | | | ||||| |||||| || | | Sbjct 10945 AGCTTTACTTCGTCCAGGTCGTTTGGAAGTACATGTTGAAATTTCATTACCAGATGAGCA 10886 Query 164949 AGGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGA 164989 || | ||||| || || ||||| |||||||||| Sbjct 10885 TGGTAGAGAACAAATCTTTAAGATTCATACAGCTAAAATGA 10845 >seq4 Length=499170 Score = 96.9 bits (106), Expect = 4e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 19356 TACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGA 19415 |||| |||| ||||||||||| | ||| | || |||||| || || ||||||||| Sbjct 388643 TACCACAAATTGGTGATAAGTTCTCCTCTCGTCATGGTCAAAAGGGTACTTGTGGTATGG 388702 Query 19416 TTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTA 19475 |||||||||||| ||| | || | ||| || ||||| || || ||| ||||| | | Sbjct 388703 CTTATCGTCAAGAGGATTTACCATGGACTGTTGAGGGTATTGTTCCAGATATTATTGTAA 388762 Query 19476 ACCCACATGCTTTTCCAAGTCGAATGAC 19503 | |||||||| ||||| ||| ||||| Sbjct 388763 ATCCACATGCCATTCCATCTCGTATGAC 388790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595864573945200