Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq57 174 2e-38 >seq57 Length=183543 Score = 174 bits (192), Expect = 2e-38 Identities = 1141/1816 (63%), Gaps = 70/1816 (4%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| | | ||| || || ||||| ||||||||||| || || |||| | Sbjct 134217 GTGAATTGAATTGCATCGGCAGCTGGACGAGTACGAAGATAGTACATACCAGTCTTTAAA 134276 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || |||| ||| |||||||| || ||||| | | | | || || || || Sbjct 134277 CCCTTCTTCCAAGAGTAGAAATGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCAGCGATG 134336 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 | ||| | | |||||||||||||||||| || || | || |||||||| | ||| Sbjct 134337 AAAACATTGAAACTTTGACTTTGATCGATGAAAGCACCACGATCAGCAGCCATATCAATG 134396 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 | || |||| |||||||||| | ||||| || | | || | || ||||||| Sbjct 134397 AGAGTTCTTTGACGAATTTCCCATACGGTTTTGTAGAGTTCTTTCAATTCATCTGGAATA 134456 Query 62235 TTTGTATTC---TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 | || || || || |||| | || || || |||||| ||||| || Sbjct 134457 CCACCAATCGATTGGATTGAACCACGTGCAGCGATGATTTGATTCTTCATCTCTGGTGTC 134516 Query 62292 CATAATTTTCT-CTCGGTTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62349 || ||| | ||| | | | | || || | || || || | | ||||| | Sbjct 134517 CA-AATGCCCAACTCCATGAGATCCTCCAACAAT-TGTTTGTTGACAATTGTGAATTCAC 134574 Query 62350 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62409 ||| ||| || | ||| ||||||| || || || ||||| | | |||||||| | Sbjct 134575 CAGCCAAGACACGACGACTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTCATTATTAC 134634 Query 62410 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62469 | | |||||| |||||| || || ||||| ||||| | ||||| ||| | |||| Sbjct 134635 CAAGGATTTGACTAGTTGAAGCGGTTGGCATTGGTGCGATCAATAGTGAATTACGTAGAC 134694 Query 62470 CGTATGTTCTGA---TTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62526 | | | ||| | ||||| |||| |||||||||||| | ||| || Sbjct 134695 CACCTTTATTGACGATCTTATCCTTTAATTCGTCCCAATTCCAACGTGAACTTGGTGTAA 134754 Query 62527 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62586 | ||| |||||||| || || || ||| | | || | Sbjct 134755 CATTCCACATATCAAATTGGAGAATACCTTTGGATGCTGGGGAACCTTGGAAACTCTCAT 134814 Query 62587 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62646 ||| || || | |||| |||| | || ||| || || |||||||||||| Sbjct 134815 ATGTGCCATCACGTACTGCTAATTCATGAGAAGCTGTTAAAGCGGCGAAATAAATGGTTT 134874 Query 62647 CGAAGATCTTCTTATTTAGATCTTG-TGCTTCCAGGCTATCAAATGG-ATA---ATTTAA 62701 | ||| | ||| | || | | ||| | | ||||| ||||| ||| |||| Sbjct 134875 CAGCGATTTCAACATTCA-ATTTAGATGCAGCAACACTATCGAATGGCATACGCATTT-- 134931 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 |||| || | || || || ||||||| |||||||||||| || | |||||| ||| Sbjct 134932 --GAATGAAAACATCGGCCAAACCTTGAATACCAATACCGATTGGACGATGTCTGAGATT 134989 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC- 62820 || ||| || ||| || ||||||| | ||| ||| ||||| ||||||||| Sbjct 134990 CGAAGTTTTTGCCTCTACAACAGGATAAAAGTTACGATCGATAATAACGTTGAGATTTAC 135049 Query 62821 --TGA-CAA-----TTA-CT----------TTGA----CCACATCCTTCAGTTTGAGAAA 62857 ||| ||| ||| || |||| | | |||||| ||| || Sbjct 135050 AGTGATCAACTTGGTTATCTCAAAGAGGAATTGATGATCGAATTCCTTCTCTTTTGGATC 135109 Query 62858 ATCAAATCGCCCATCTATTACAAAC--ATGTTC-AAG-GCAACAGATGCCAGATTACAAA 62913 | | | | | | || || || || ||| |||| ||| || |||||||| | Sbjct 135110 TGTGGAGC-CTGGTTTTTGACGAATGAATTTTGGAAGTGCAATAGAGGCAAGATTACATA 135168 Query 62914 CGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62973 | || | |||| || | ||||| || |||||||| ||||||||||| | ||| Sbjct 135169 CAGCAATTTCATCAGGTGATGTGTATTGAATGATCTCAGTACAAAGATTACTGCTACTGA 135228 Query 62974 TAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 63033 | || || | ||| | |||||| || || || ||||||||||| | ||||||| Sbjct 135229 TGGTACCGAGATTCTTTTGATTGGATTTAGCATTGCAAGCATCCTTATACAATATGAATG 135288 Query 63034 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 63093 | ||||||||||||| || || || ||||| || ||| | || | ||||| |||| Sbjct 135289 GTGTACCAGTTTCAACTTGTGACTCCATAATTGCAAACCAAAGTTCTTGTGCCTTAATTA 135348 Query 63094 TAGAT-TTGTA---TCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCT 63149 | | ||| | ||| | | ||| ||| | || | | | | || || Sbjct 135349 CACGTCTTGGAAGATCTGGTGTTGCTTC---ATATTTTA---AGTAGAGGGCACGATGCT 135402 Query 63150 CCCCAAACATTGTCCAAT-----CCAGGACATTCATCCGGACACATCAACGACCACTCTC 63204 || || | ||| | || || |||| ||||| | | | ||| || | Sbjct 135403 CCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTCATTTGGACAAAAGAGTGCCCAATCAC 135462 Query 63205 CGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 63264 | | | | || |||| |||||||| |||| | ||| ||||| || || |||| Sbjct 135463 CATTTTGTTCAACACGTTCCATAAAGATATCACTGACCCAGAGAGCGTAGAAGAGGTCTC 135522 Query 63265 TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 63324 | | ||| || || || || || || || || ||||| | ||| | | | ||| | Sbjct 135523 TTGCTCTCATCTCTTCTTTACCAGTGTTTTTCTTGAGATCAATAAACTCAAATACATCGG 135582 Query 63325 AATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTA 63384 |||||| || || ||||| | ||| | | || | || || || || || | Sbjct 135583 CATGCCATGGCTCTAAGTAGACGGCAAAGGCACCTTTTCTCTTACCACCACCTTGGTCAA 135642 Query 63385 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA-TACCA 63443 || | || || | ||| |||| | | |||||| | | |||||| | || ||||| Sbjct 135643 CATAACGTGCAGTATCATTGAAAACACGAAGCATTGGTACCAAACCGTT-GCTAGTACCA 135701 Query 63444 TTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCC 63503 |||||||| ||||| ||| | ||||||||| || | | | ||| || || Sbjct 135702 TTGGTACCACGAATATAACTTTGAGCGGCACGAATCTTGTGGACGGCAATACCAATACCA 135761 Query 63504 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTA 63563 || || |||| ||||||||||| ||| ||||||| || || |||||||| ||||| Sbjct 135762 CCAGCACTTTTTGAGATTAATGCACATTGTTTTAAGGTATCGTAGATACCATCTATTGAG 135821 Query 63564 TCATCGATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACGACTAGTTCCCGCAT 63621 || || |||| | || | ||||| || |||| | |||||| | || || |||| Sbjct 135822 TCCTCCTTCATTTGAACCAAGAAACAACTTGACATCTGTGGTGATG--GTGTACCTGCAT 135879 Query 63622 TAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAA 63681 | || ||||| |||| ||| || || ||| |||| | ||| || | ||||| || | || Sbjct 135880 TGAACAAGGTTGGAGTAGCATGGGTGAACAATTTCTGAGAGAGATGTTTGTAGGTGTTAA 135939 Query 63682 TAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAG 63741 | || || || || ||| || ||||| | ||||||||| ||||| || || | Sbjct 135940 TGGCACTATCGATGTCTTCACCATGGATACCTACAGAGACACGCATCAACATATGTTGTG 135999 Query 63742 GTCTTTCAACGATCTT 63757 | | ||| || || || Sbjct 136000 GACGTTCCACAATTTT 136015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939436520520