Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq57 179 5e-40 >seq57 Length=183543 Score = 179 bits (198), Expect = 5e-40 Identities = 1142/1820 (63%), Gaps = 78/1820 (4%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| | | ||| || || ||||| ||||||||||| || || |||| | Sbjct 134217 GTGAATTGAATTGCATCGGCAGCTGGACGAGTACGAAGATAGTACATACCAGTCTTTAAA 134276 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || |||| ||| |||||||| || ||||| | | | | || || || || Sbjct 134277 CCCTTCTTCCAAGAGTAGAAATGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCAGCGATG 134336 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 | ||| | | |||||||||||||||||| || || | || |||||||| | || Sbjct 134337 AAAACATTGAAACTTTGACTTTGATCGATGAAAGCACCACGATCAGCAGCCATATCAATG 134396 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 | || |||| |||||||||| | ||||| || | | || | || ||||||| Sbjct 134397 AGAGTTCTTTGACGAATTTCCCATACGGTTTTGTAGAGTTCTTTCAATTCATCTGGAATA 134456 Query 62090 TTTGTATTC---TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 | || || || || |||| | || || || |||||| ||||| || Sbjct 134457 CCACCAATCGATTGGATTGAACCACGTGCAGCGATGATTTGATTCTTCATCTCTGGTGTC 134516 Query 62147 CATAATTTTCT-CTCGGTTAAAAC-TCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62204 || ||| | ||| | | | | || || | || || || | | ||||| | Sbjct 134517 CA-AATGCCCAACTCCATGAGATCCTCCAACAAT-TGTTTGTTGACAATTGTGAATTCAC 134574 Query 62205 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 62264 ||| ||| || | ||| ||||||| || || || ||||| | | |||||||| | Sbjct 134575 CAGCCAAGACACGACGACTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTCATTATTAC 134634 Query 62265 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62324 | | |||||| |||||| || || ||||| ||||| | ||||| ||| | |||| Sbjct 134635 CAAGGATTTGACTAGTTGAAGCGGTTGGCATTGGTGCGATCAATAGTGAATTACGTAGAC 134694 Query 62325 CGTATGTTCTGA---TTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381 | | | ||| | ||||| |||| |||||||||||| | ||| || Sbjct 134695 CACCTTTATTGACGATCTTATCCTTTAATTCGTCCCAATTCCAACGTGAACTTGGTGTAA 134754 Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62441 | ||| |||||||| || || || ||| | | || | Sbjct 134755 CATTCCACATATCAAATTGGAGAATACCTTTGGATGCTGGGGAACCTTGGAAACTCTCAT 134814 Query 62442 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501 ||| || || | |||| |||| | || ||| || || |||||||||||| Sbjct 134815 ATGTGCCATCACGTACTGCTAATTCATGAGAAGCTGTTAAAGCGGCGAAATAAATGGTTT 134874 Query 62502 CGAAGATCTTC----TT--ATTTAGATCTTGCGCTTCCAGGCTATCAAATGG-ATA---A 62551 | ||| ||| || |||||||| || | | ||||| ||||| ||| | Sbjct 134875 CAGCGAT-TTCAACATTCAATTTAGAT-----GCAGCAACACTATCGAATGGCATACGCA 134928 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 ||| |||| || | || || || ||||||| |||||||||||| || | |||||| Sbjct 134929 TTT----GAATGAAAACATCGGCCAAACCTTGAATACCAATACCGATTGGACGATGTCTG 134984 Query 62612 TTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 ||| || ||| || ||| || ||||||| | ||| ||| ||||| |||||| Sbjct 134985 AGATTCGAAGTTTTTGCCTCTACAACAGGATAAAAGTTACGATCGATAATAACGTTGAGA 135044 Query 62672 TTTC---TGA-CAA-----TTA-CT----------TTGA----CCACATCCTTCAGTTTG 62707 ||| ||| ||| ||| || |||| | | |||||| ||| Sbjct 135045 TTTACAGTGATCAACTTGGTTATCTCAAAGAGGAATTGATGATCGAATTCCTTCTCTTTT 135104 Query 62708 AGAAAATCAAATCGCCCATCTATTACAAAC--ATGTTCAA--TGCAACAGATGCCAGATT 62763 || | | | | | | || || || || | ||||| ||| || ||||| Sbjct 135105 GGATCTGTGGAGC-CTGGTTTTTGACGAATGAATTTTGGAAGTGCAATAGAGGCAAGATT 135163 Query 62764 ACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACA 62823 ||| || || | |||| || | ||||| || |||||||| ||||||||||| | Sbjct 135164 ACATACAGCAATTTCATCAGGTGATGTGTATTGAATGATCTCAGTACAAAGATTACTGCT 135223 Query 62824 CTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAAT 62883 ||||||| || | ||| | |||||| || || || ||||||||||| | || Sbjct 135224 ACTGATGGTACCGAGATTCTTTTGATTGGATTTAGCATTGCAAGCATCCTTATACAATAT 135283 Query 62884 GAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTT 62943 |||||| ||||||||||||| || || || ||||| || ||| | || | ||||| Sbjct 135284 GAATGGTGTACCAGTTTCAACTTGTGACTCCATAATTGCAAACCAAAGTTCTTGTGCCTT 135343 Query 62944 TATTATAGAT-TTGTA---TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACT 62999 |||| | | ||| | ||| | | ||| ||| | || | | | | || Sbjct 135344 AATTACACGTCTTGGAAGATCTGGTGTTGCTTC---ATATTTTA---AGTAGAGGGCACG 135397 Query 63000 CGTCTCCCCAAACATTGTCC-----AGTCCAGGACATTCATCCGGACACATCAACGACCA 63054 |||| || | ||| || || || |||| ||||| | | | ||| Sbjct 135398 ATGCTCCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTCATTTGGACAAAAGAGTGCCCA 135457 Query 63055 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63114 || || | | | || |||| |||||||| |||| | ||| ||||| || || Sbjct 135458 ATCACCATTTTGTTCAACACGTTCCATAAAGATATCACTGACCCAGAGAGCGTAGAAGAG 135517 Query 63115 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63174 ||||| | ||| || || || || || || || || ||||| | ||| | | | Sbjct 135518 GTCTCTTGCTCTCATCTCTTCTTTACCAGTGTTTTTCTTGAGATCAATAAACTCAAATAC 135577 Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234 ||| | |||||| || || ||||| | ||| | | || | || || || || Sbjct 135578 ATCGGCATGCCATGGCTCTAAGTAGACGGCAAAGGCACCTTTTCTCTTACCACCACCTTG 135637 Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294 || | || | || || | ||| |||| | | |||||| | | ||| ||| || Sbjct 135638 GTCAACATAACGTGCAGTATCATTGAAAACACGAAGCATTGGTACCAAACCGTTGCTAGT 135697 Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63354 ||||||||| || ||||| ||| | ||||||||| || | | | ||| || Sbjct 135698 ACCATTGGTACCACGAATATAACTTTGAGCGGCACGAATCTTGTGGACGGCAATACCAAT 135757 Query 63355 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 63414 || || || |||| ||||||||||| ||| ||||||| ||||| ||||| || ||||| Sbjct 135758 ACCACCAGCACTTTTTGAGATTAATGCACATTGTTTTAAGGTATCGTAGATACCATCTAT 135817 Query 63415 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACA--TTTGGTGACGACTAGTTCCC 63472 || ||| |||| | || | ||||| || |||| | |||||| | || || Sbjct 135818 TGAGTCCTCCTTCATTTGAACCAAGAAACAACTTGACATCTGTGGTGATG--GTGTACCT 135875 Query 63473 GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63532 ||||| || ||||| |||| ||| || || ||| |||| | ||| || | ||||| || Sbjct 135876 GCATTGAACAAGGTTGGAGTAGCATGGGTGAACAATTTCTGAGAGAGATGTTTGTAGGTG 135935 Query 63533 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63592 | ||| || || || || ||| || ||||| | ||||||||| ||||| || Sbjct 135936 TTAATGGCACTATCGATGTCTTCACCATGGATACCTACAGAGACACGCATCAACATATGT 135995 Query 63593 TGAGGTCTTTCAACGATCTT 63612 || || | ||| || || || Sbjct 135996 TGTGGACGTTCCACAATTTT 136015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624103361200