Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq175 86.0 7e-12 >seq175 Length=69793 Score = 86.0 bits (94), Expect = 7e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 46357 ATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATT 46416 || ||| || || |||||||| | | |||| ||| | || |||||||| || || Sbjct 5086 ATTTTAATTTCCACCTCTTAATCTGAGTACCAAATGGAGAGTGGATTCCTTTTGAATGTT 5145 Query 46417 GTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTG 46476 |||||| || ||||| || |||| || || || || |||||||| || | || || || Sbjct 5146 GTAGTCAGAAAGAGTACGACCGTCTTCTAGTTGTTTACCGGCGAAAATGAGACGTTGTTG 5205 Query 46477 GTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT 46536 || | || | | || || || ||||| |||| | || | | |||| || Sbjct 5206 ATCTGGTGGAATACCTTCTTTATCTTGAATCTTGGTCTTTACATTCTCGATATTGTCACT 5265 Query 46537 CGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || | || ||||| || || || || |||||||||||||||||||| Sbjct 5266 ACCTTCAACTTCAAGAGTAATGGTCTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 5322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231355716440