Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq57 315 9e-81 seq608 113 6e-20 seq24 95.1 2e-14 seq35 87.8 2e-12 >seq57 Length=183543 Score = 315 bits (348), Expect = 9e-81 Identities = 1146/1774 (65%), Gaps = 60/1774 (3%) Strand=Plus/Minus Query 111604 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTG 111663 ||||| ||||| | ||||| ||||| ||| | | ||||||||||| ||||| || | Sbjct 136008 TGGAACGTCCACAACATATGTTGATGCGTGTCTCTGTAGGTATCCATGGTGAAGACATCG 135949 Query 111664 ATTCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTA--TGTTCATCCACGCAACACC 111721 || || | | || ||| | | || || | | | |||||| ||| || || || Sbjct 135948 ATAGTGCCATTAACACCTACAA--ACATCTCTCTCAGAAATTGTTCACCCATGCTACTCC 135891 Query 111722 AACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAA 111781 |||| | ||||| || ||||||||| ||| || ||||| ||||||||| | || || Sbjct 135890 AACCTTGTTCAATGCAGGTACACCATCACCACAGATGTCAAGTTGTTTCTTGGTTCAAAT 135831 Query 111782 CAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAA 111841 |||||||| ||||| |||| || |||| || | | ||||||| ||||||||| Sbjct 135830 GAAGGAGGACTCAATAGATGGTATCTACGATACCTTAAAACAATGTGCATTAATCTCAAA 135771 Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAG 111901 | ||||||||||| || || | |||| | | | ||| | | |||| | Sbjct 135770 AAGTGCTGGTGGTATTGGTATTGCCGTCCACAAGATTCGTGCCGCTCAAAGTTATATTCG 135711 Query 111902 AGGTACAAATGGT-CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 111960 ||||| |||||| | | || | ||| | | ||||||||||| || || || | || | Sbjct 135710 TGGTACCAATGGTACTAGCA-ACGGTTTGGTACCAATGCTTCGTGTTTTCAATGATACTG 135652 Query 111961 CGCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTATCGCAGTCTATCTTGAGC 112017 | || ||||| |||||| ||| || | || || | | || ||||| | |||| Sbjct 135651 CACGTTATGTTGACCAAGGTGGTGGTAAGAGAAAAGGTGCCTTTGCCGTCTACTTAGAGC 135592 Query 112018 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA------GGTGATG 112071 ||||||| || ||| | | ||||| |||| |||||| || ||| | | Sbjct 135591 CATGGCATGCCGATGTATTTGAGTTTATTGA------TCTCAAGAAAAACACTGGTAAAG 135538 Query 112072 AGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGA 112131 | ||| | | | || ||||||| |||||||||| | ||| |||| ||| | Sbjct 135537 AAGAGATGAGAGCAAGAGACCTCTTCTACGCTCTCTGGGTCAGTGATATCTTTATGGAAC 135478 Query 112132 GAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCG 112191 | ||||| | | ||| ||||| | |||||||||||| | ||||||| |||||||| | Sbjct 135477 GTGTTGAACAAAATGGTGATTGGGCACTCTTTTGTCCAAATGAGGCACCAGGTCTCTCTG 135418 Query 112192 ATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGA 112251 | | ||||||| | ||||||||| ||| || || | | | | | | Sbjct 135417 AGACTCACTCTGAGGAGCATCGTGCCCTCTACTTAAAATATGAAGCA-ACACCAGATCTT 135359 Query 112252 CTGCGACGGTGCCA-----GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGA 112306 | |||| || | || || | ||| || ||| | |||| ||| || Sbjct 135358 CCAAGACG-TGTAATTAAGGCACAAGAACTTTGGTTTGCAATTATGGAGTCACAAGTTGA 135300 Query 112307 GACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366 ||||||||||||| || | || || || || || || || ||||||||||| Sbjct 135299 AACTGGTACACCATTCATATTGTATAAGGATGCTTGCAATGCTAAATCCAATCAAAAGAA 135240 Query 112367 TTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGA 112426 | | ||| |||| || || || ||||| || ||| | ||| ||| || Sbjct 135239 TCTCGGTACCATCAGTAGCAGTAATCTTTGTACTGAGATCATTCAATACACATCACCTGA 135180 Query 112427 TGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--AT--GT-------- 112474 ||| | ||||| ||||| || || || || || || || || | || || Sbjct 135179 TGAAATTGCTGTATGTAATCTTGCCTCTATTGCACTTCCAAAATTCATTCGTCAAAAACC 135120 Query 112475 -GGATCCAGAGAC---AAAGACA-----TTTGATTATGAAAAACTCCACGAAGTTACGAA 112525 || |||| ||| ||||| | || ||| || || ||| || | || || Sbjct 135119 AGGCTCCACAGATCCAAAAGAGAAGGAATTCGATCATCAATTCCTCTTTGAGATAACCAA 135060 Query 112526 AACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTG-AGACTG 112584 |||| ||| || ||| |||| ||| | || ||||| || |||| ||| | Sbjct 135059 GTTGATCACTGTAAATCTCAACGTTATTATCGATCGTAACTTTTATCCTGTTGTAGAG-G 135001 Query 112585 CTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG 112644 | | || ||| | ||||| |||||||| ||| | ||| | |||||| | || |||| Sbjct 135000 CAAAAACTTCGAATCTCAGACATCGTCCAATCGGTATTGGTATTCAAGGTTTGGCCGATG 134941 Query 112645 TATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTA 112704 | ||||||| || |||| ||| | | || || | |||| | Sbjct 134940 TTTTCATTCAAATGCGTATGCCATTCGATAGTGTTGCTGCATCTAAATTGAATGTTGAAA 134881 Query 112705 TATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATG 112764 | ||| || || ||| ||||||| | || | || || |||| ||||| Sbjct 134880 TCGCTGAAACCATTTATTTCGCCGCTTTAACAGCTTCTCATGAATTAGCAGTACGTGATG 134821 Query 112765 GTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGT 112824 | ||||||| | || | ||||| ||||| || |||| | || ||||||||||||| Sbjct 134820 GCACATATGAGAGTTTCCAAGGTTCCCCAGCATCCAAAGGTATTCTCCAATTTGATATGT 134761 Query 112825 GGGAAGGTGAGACCAAGCTTCACTACG--ACTGGGACGCTCTCAAGGA-ACG--CATCAA 112879 || || || | |||||| ||||| | | ||||||| | ||||| | | | |||| Sbjct 134760 GG-AATGTTACACCAAG-TTCACGTTGGAATTGGGACGAATTAAAGGATAAGATCGTCAA 134703 Query 112880 GGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACA 112939 | ||||| ||||| || ||||| |||||||||||||| || || || || Sbjct 134702 TAAAGGTGGTCTACGTAATTCACTATTGATCGCACCAATGCCAACCGCTTCAACTAGTCA 134643 Query 112940 AATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAAC 112999 |||| | ||||||||||||||||||||||| ||||| | ||||| || | | Sbjct 134642 AATCCTTGGTAATAATGAATGCTTTGAACCATACACTTCAAACATTTACAGTCGTCGTGT 134583 Query 113000 CCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGG 113059 | | || || || || ||||||||||| || | |||| || |||| ||| | || Sbjct 134582 CTTGGCTGGTGAATTCACAATTGTCAACAAACAATTGTTGGAGGATCTCATGGAGTTGGG 134523 Query 113060 TCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATAT 113119 | ||| | || |||||| ||| || | || ||||||| || ||| || Sbjct 134522 CATTTGGACACCAGAGATGAAGAATCAAATCATCGCTGCACGTGGTTCAATCCAATCGAT 134463 Query 113120 TGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAA 113179 || | ||||||||||||| | || | | ||| || || |||||||| | || Sbjct 134462 TGGTGGTATTCCAGATGAATTGAAAGAACTCTACAAAACCGTATGGGAAATTC-GTCAAA 134404 Query 113180 GGA-TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA 113238 | | | ||||||| ||||| || ||||||||| ||||| ||||||||||||||| | | Sbjct 134403 GAACTCTCATTGATATGGCTGCTGATCGTGGTGCTTTCATCGATCAAAGTCAAAGTTTCA 134344 Query 113239 ATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGA 113298 || | ||||| | ||||| | | || ||| |||| ||||| | ||| ||||| Sbjct 134343 ATGTTTTCATCGCTGAACCAACCTTTGCAAAACTCACTTCAATGCATTTCTACTCTTGGA 134284 Query 113299 AGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332 |||||||| | || || || ||||| || || || Sbjct 134283 AGAAGGGTTTAAAGACTGGTATGTACTATCTTCG 134250 >seq608 Length=3544 Score = 113 bits (124), Expect = 6e-20 Identities = 203/288 (70%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 ||| | |||||| || | |||||| ||||| | || ||| | || |||| ||||| Sbjct 1731 GATTTGACGATCGAATCTACCTGGACGAAGTAATGCTGGATCTAAGACATCACTACGATT 1790 Query 15938 CGTTGCGGCGATGACAACAATACCTGTTTCGTT-ATCA-AAACCATCCATCTCTGTCAAA 15995 || |||||| ||||| | ||| | | || || | ||||||||||||||| || Sbjct 1791 GGTACCGGCGAATACAACCACACCCGAT--GTAGATGAGAAACCATCCATCTCTACTAAT 1848 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 16055 || || || | || | || | |||||| || ||| | ||||||| | |||| Sbjct 1849 AGTTGATTCAATGTATTCTCTCTTTCATCGTTA--TGGAA-ACCACCACGTGATC-TTGC 1904 Query 16056 TTT-CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 | | ||||| ||||| |||||||| ||||| |||||||| ||| |||| | ||||| | Sbjct 1905 TCTACCCACTGCATCGATCTCATCGATGAATACGATGCAAGGTGTATTTGCACGAGCCTC 1964 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTC 16162 || |||||| || | ||||| | || ||||||||||||||||| Sbjct 1965 TTTAAAGAGGTCTCTAACACGAGATGGACCTACACCAACAAACATCTC 2012 >seq24 Length=311718 Score = 95.1 bits (104), Expect = 2e-14 Identities = 278/423 (66%), Gaps = 19/423 (4%) Strand=Plus/Plus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 ||||| | ||| || | |||||| | ||| | || | ||| | |||||| | || Sbjct 86479 GATCTGTCTATCGAATCTACCTGGTCTAAGTAATGCTTTATCCAAGATATCGGGTCTGTT 86538 Query 15938 CGTTGCGGCGATGACAACAATACCTGTTTCGTTA--TCAAAACCATCCATCTCTGTCAAA 15995 || || || | ||| || ||| | |||| | | ||||||||||| || |||| Sbjct 86539 TGTGGCAGCCAAGACCAC--TACGTTTTTCAATGGTTTGAAACCATCCATTTCAACCAAA 86596 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCG---CTGGCATACCACCAGCACTGCGT 16052 || || || | || | || || |||||||||| | | | |||||| || | | Sbjct 86597 AGTTGATTTAATGTATTCTCACGCTCATCATTCGAACCAGAGAAACCACCTTTACCTC-T 86655 Query 16053 TGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 16111 |||| | || | |||||||||||||| ||||| || ||||| ||| || | | || Sbjct 86656 TGCTCTACCGATTGCATCAATCTCATCTATGAAAACAATGCAAGGTGCGTTCTTTCTTGC 86715 Query 16112 GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 16171 |||||| | || | ||||| | || ||||||||||||||||| || || | Sbjct 86716 TTGTTCAAATAATTCTCTAACACGTGATGGACCAACACCAACAAACATCTCTACGAAATC 86775 Query 16172 TGCGGCGGAACATTGG-----ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCG 16226 | | | || ||| | ||| || ||||| |||||||| || | ||| ||| Sbjct 86776 T-----GAACCACTGGTTGAAAAGAATGGTACATTTGATTCACCTGCGGTTGCTTTGGCA 86830 Query 16227 AGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCG 16286 | | || ||||| |||||||| || | | || ||||||| ||||||||| || Sbjct 86831 ATCAATGTTTTACCGGTACCTGGTGGTCCAACCAAGATTGCACCTCTTGGAATCTTTGCT 86890 Query 16287 CCA 16289 ||| Sbjct 86891 CCA 86893 >seq35 Length=230046 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 16118 ||||| | ||||||||||| ||||| || || |||||| ||| | | ||| ||||| Sbjct 19110 CCCACAGAGTCAATCTCATCGATGAATACAATACATGGTGAATTCTTTCTGGCGGCTTCA 19169 Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAA 16156 || ||||| |||||||| || || |||||||||||||| Sbjct 19170 AATAGATCACGTACACGTTTTGCTCCCACACCAACAAA 19207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734663997840