Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq38 89.7 7e-13 >seq38 Length=218761 Score = 89.7 bits (98), Expect = 7e-13 Identities = 214/319 (67%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 19385 GGGCTGCTCAAGATACTATGCCATTAGACTGGTCTTTACCTTTGGCCAAAGAACTTACTT 19444 |||| || ||| ||| ||| | | || ||| | ||||| || || ||||| || || Sbjct 162747 GGGCAGCACAACCTACAATGGGAATGGATTGGGCATTACCATTAGCAAAAGA---TA-TT 162802 Query 19445 TATCCGGTAAAGAGACAA----TTATTTCATTTGGTGGAGCAAGTAACCCAGATATTTCA 19500 | || ||| | | || |||||||||||||||| ||| |||| |||||| || Sbjct 162803 CAACCATCAAATAAAAAAGTTGTTATTTCATTTGGTGGTGCATCAAACCAAGATATCTCT 162862 Query 19501 TATAAATTTTCCATTGATGAATTGGTTCAAACTTACCTTGATGTGATAGAATTATATAAT 19560 | ||| |||| |||| ||||| || |||| || | | | || || | ||| | Sbjct 162863 ATTCAATATTCCGTTGAGAAATTGATTGAAACCTATGGTAAATTCATTGATATGTATCAA 162922 Query 19561 CCATCTGGATTAGATTTTGATTTAGAAAATGGTCTGTATGATGCCGAAAAAATAAGTTCA 19620 | | |||||| |||||||||||||| |||||| | | | ||| | || || | | Sbjct 162923 GCCTATGGATTGGATTTTGATTTAGAGAATGGTTTATTTAATGATAAGAATATTGCATTA 162982 Query 19621 GCTATTTCTGT-TGTTAAGTCTAAATATCCCAACTGTAATATTTCTCTTACACTACCAAC 19679 || ||| | ||||| || |||||||| || | |||| | | ||||| ||||| Sbjct 162983 GC-ATTGAAATCCGTTAAATCAAAATATCCAAATCTTGTTATTAGTTTAACACTTCCAAC 163041 Query 19680 AATGCCAACCGGTTTGACA 19698 | ||||| ||||| ||| Sbjct 163042 CTTACCAACTGGTTTAACA 163060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658394994650120