Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq90 84.2 2e-11 >seq90 Length=138661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/206 (70%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 66844 TTATTTG-TAGGCATCCATCGTGCCAGTTTTAAATACATTAATTACTCGTTTAGCACGAT 66902 || |||| |||| ||| | |||||||||| ||| ||| | | ||||| | | ||||| Sbjct 37818 TTTTTTGATAGGAATCAAGTGTGCCAGTTTCAAAGACACTGACTACTCTATCTGAACGAT 37877 Query 66903 TTGGTGTCTGTTTAAACCATTTAGA-TTGGGCAAGGTTCAAAG-CAGCTTGGTCCCACTG 66960 | ||||| || || ||| |||| || ||| |||| | |||| | ||||| Sbjct 37878 TAGGTGTTTGACTATGCCAAGTAGAATTTTTCAA--TTCAGTGGCAGCATCACTCCACTT 37935 Query 66961 TTTTGCTTTAAGTAGTTTAATAGAGTTATTAAATCCAGCAACGCCAGCAACACCCATTTG 67020 |||| |||||| ||| |||| || || ||||| | ||| ||| |||||| ||| Sbjct 37936 TTTTTCTTTAATTAGGTTAAGTGATTTCTTAAAATTTGAAACTCCATTTGCACCCAATTG 37995 Query 67021 GAATACCATATTCACTAAAGCCATTT 67046 ||||||||||| | |||||||||| Sbjct 37996 AAATACCATATTTTCCAAAGCCATTT 38021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540054069492280