Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq57 152 3e-32 >seq57 Length=183543 Score = 152 bits (168), Expect = 3e-32 Identities = 324/475 (68%), Gaps = 14/475 (3%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||||||||| || | ||||||| ||||||| ||||| |||||||| | ||| Sbjct 135437 ATTTGGACAAAAGAGTGCCCAATCACCATTTTGTTCAACACGTTCCATAAAGATATCACT 135496 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTT 26006 | ||| | || || || | ||||| |||||||| |||||||| || ||| || || | Sbjct 135497 GACCCAGAGAGCGTAGAAGAGGTCTCTTGCTCTCATCTCTTCTTTACCAGTGTTT-TTCT 135555 Query 26007 TTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTAC 26066 | ||||| | || ||||| | ||| | |||||||| ||||| |||| ||||| || Sbjct 135556 TGAGATCAATAAACTCAAATACATCGGCATGCCATGGCTCTAAGTAGACGGCAAAGGCAC 135615 Query 26067 CTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACA 26126 ||||||| || || |||||||| || || || | |||||| ||||||||||| | || Sbjct 135616 CTTTTCTCTTACCACCACCTTGGTCAACATAACGTGCAGTATCATTGAAAACACGAAGCA 135675 Query 26127 TTGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAAT----CTTGGATCCTGTCGA 26181 |||| || || || |||| | | || || || | | |||| ||| || | | Sbjct 135676 TTGGTACCAAACC-GTTGCTAGTACCATTGGTACCACGAATATAACTTTGA----GCGGC 135730 Query 26182 TCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC 26241 | ||| | ||| | |||||| || |||||||| | |||||| || |||||| | Sbjct 135731 ACGAATCTTGTGGACGGCAATACCAATACCACCAGCACTTTTTGAGATTAATGCACATTG 135790 Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGA 26301 | | |||||| | || || | ||| || | |||||| | || |||||| Sbjct 135791 TTTTAAGGTATCGTAGATACCATCTATTGAGTCCTCCTTCATTTGAACCAAGAAACAACT 135850 Query 26302 AGATAATTGCGAATGA-GTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGT 26355 || | || | ||| | ||| |||| ||| || || || || |||||||| || Sbjct 135851 TGACATCTGTG-GTGATGGTGTACCTGCATTGAACAAGGTTGGAGTAGCATGGGT 135904 Score = 125 bits (138), Expect = 4e-24 Identities = 337/502 (67%), Gaps = 15/502 (3%) Strand=Plus/Plus Query 24686 GCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAA 24745 ||||| ||| | |||||| ||||| ||||| || || |||||||||| ||| ||| Sbjct 134238 GCTGGACGAGTACGAAGATAGTACATACCAGTCTTTAAACCCTTCTTCCAAGAGTAGAAA 134297 Query 24746 TGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTA--AAAACAAGTTCATCGATTGAG 24803 |||||||| || |||||||||| | ||| | | | |||||| || | |||| Sbjct 134298 TGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCAGCGATGAAAACA--TTGAAACTTTGAC 134355 Query 24804 CTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTT-TTCATCGATATA 24862 ||| | ||| | ||| ||||| | ||||||| ||| || ||| || Sbjct 134356 TTTGATCGATGAAAGCACCACGATCAGCAGCCATATCAATGAGAGTTCTTTGACGA-ATT 134414 Query 24863 TCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACT 24922 || | | |||||||| ||||| | ||| |||||||| |||| ||| | | Sbjct 134415 TCCCATACGGTTTTGTAGAGTTCTTTCAATTCATCTGGAATACCACCAATCGATTGGATT 134474 Query 24923 GATCCATTTTCTCTCAATAGATTCAATCT-CATATTCGGTGTCCAAA-GATTAATTTTTT 24980 || ||| | | | || || | ||| ||| | |||||||||| | || | | Sbjct 134475 GAACCACGTGCAG-CGATGATTTGATTCTTCATCTCTGGTGTCCAAATGCCCAACTCCAT 134533 Query 24981 CAAGATC-TCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTT 25039 | |||| || || ||| ||||| || | || | ||||| |||| ||| || | | Sbjct 134534 GA-GATCCTCCAA-CAATTGTTTGTTGACAATTGTGAATTCACCAGCCAAGACACGACGA 134591 Query 25040 ATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTA 25099 | | | |||||||||| |||||||||| ||||||||||| || | ||||||| ||| Sbjct 134592 CTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTCATTATTACCAAGGATTTGACTAGTT 134651 Query 25100 GATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTA---ACAATC 25156 || || ||||||||| ||| || ||||| ||||| | | |||| |||| || ||| Sbjct 134652 GAAGCGGTTGGCATTGGTGCGATCAATAGTGAATTACGTAGACCACCTTTATTGACGATC 134711 Query 25157 TCTTGTTTTAATTTATCCCAAT 25178 | | ||||||| ||||||| Sbjct 134712 TTATCCTTTAATTCGTCCCAAT 134733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253036925326775