Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq175 95.1 1e-14 >seq175 Length=69793 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| |||||| | || || || |||||||| | ||| || | | | Sbjct 5322 ATGCAAATCTTTGTTAAAACTCTCACTGGTAAGACCATTACTCTTGAAGTTGAAGGTAGT 5263 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || | | ||| | ||||| |||||| ||||||||||| | || ||||| Sbjct 5262 GACAATATCGAGAATGTAAAGACCAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 5203 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || |||| || |||||||| || || |||| || | | ||||||||| Sbjct 5202 CAACGTCTCATTTTCGCCGGTAAACAACTAGAAGACGGTCGTACTCTTTCTGACTACAAC 5143 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAAT 107795 ||||||||||| || || | || |||| | ||||| |||| |||||| ||||| | Sbjct 5142 ATTCAAAAGGAATCCACTCTCCATTTGGTACTCAGATTAAGAGGTGGAAAT--TAAAATT 5085 Query 107796 A 107796 | Sbjct 5084 A 5084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398871953272933