Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq392 111 3e-19 >seq392 Length=6865 Score = 111 bits (122), Expect = 3e-19 Identities = 196/281 (70%), Gaps = 20/281 (7%) Strand=Plus/Plus Query 166450 TCAGCA--GTTATTGAGAAGCTGGACAAAGAGATCGCTGACTTCGAACTTAACGCCGACT 166507 |||||| || || || || |||| |||||||| || |||||| || || | Sbjct 5785 TCAGCAAAGTAATCAAGCAGTTGGAAAAAGAGATTCTGGATTTCGAAGCAAATATTGATT 5844 Query 166508 ACGCGTTGTCCGAATCTAACGCAACGACCAAGATCACTGTTGAACTTGGTAACATTGCTT 166567 ||||||| |||||||||||||| | ||||| ||| ||||| |||| | | || Sbjct 5845 ACGCGTTATCCGAATCTAACGCTTCCACCAAAATCGAAATTGAAGATGGTGTGGTAGTTT 5904 Query 166568 AACCCGTATTAAAAGGCTTGTCTTCGTTTGACGAAAGATCAAACACCGCCTTCCTATTTG 166627 || | ||||||| ||||||||||||||||||| || ||||||||| ||| Sbjct 5905 AATCAA-ATTAAAAATCTTGTCTTCGTTTGACGAATAGTCGAACACCGCCCTCC------ 5957 Query 166628 GCCGGATGGAAGTAAAATAACCGGCCAGCCATTATACA-TCTGTAGGTCGCAGGTTCGAT 166686 ||| || ||| |||| || | | |||||| |||| ||||| ||||||| Sbjct 5958 -------GGAGGTTAAACAACCAGCTCACTA-TATACACGCTGTGGGTCGATGGTTCGAG 6009 Query 166687 TCCTGTCGGGGTGAAAC-CCGTAGCTCAGTCGGTTAGAGCA 166726 |||| || | ||||| | |||||||||||||||| |||| Sbjct 6010 TCCT-TCCTGTGGAAACACAGTAGCTCAGTCGGTTATAGCA 6049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867329990765280