Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq38 127 3e-24 >seq38 Length=218761 Score = 127 bits (140), Expect = 3e-24 Identities = 478/741 (65%), Gaps = 43/741 (6%) Strand=Plus/Plus Query 93140 GGGCTGCTCAAGATACTATGCCATTAGACTGGTCTTTACCTTTAGCCAAAGAACTTGCTT 93199 |||| || ||| ||| ||| | | || ||| | ||||| ||||| ||||| || Sbjct 162747 GGGCAGCACAACCTACAATGGGAATGGATTGGGCATTACCATTAGCAAAAGATATTCAAC 162806 Query 93200 TATCTGGTAAAGAAACAATTATTTCATTCGGTGGAGCAAGTAACCCAGATATTTCATCTA 93259 ||| |||| || |||||||||| ||||| ||| |||| |||||| || | Sbjct 162807 CATCAAATAAAAAAGTTGTTATTTCATTTGGTGGTGCATCAAACCAAGATATCTCTATTC 162866 Query 93260 AATTTTCAATTGATGAATTGGTTCAAACTTACTTTGATGTAATAGAATTATATAATCCAT 93319 ||| ||| |||| ||||| || |||| || | | | || || | ||| | | | Sbjct 162867 AATATTCCGTTGAGAAATTGATTGAAACCTATGGTAAATTCATTGATATGTATCAAGCCT 162926 Query 93320 CTGGATTAGATTTTGATTTAGAAAATGGTTTGTATGACGCAGAAAAAATAAGTTCAGCTG 93379 |||||| |||||||||||||| |||||||| | | | | | || || | ||| Sbjct 162927 ATGGATTGGATTTTGATTTAGAGAATGGTTTATTTAATGATAAGAATATTGCATTAGC-A 162985 Query 93380 TTGGCAT-TGTCAAATCTAAATACCCTAATTGTAATATTTCTCTGACACTACCAACAATG 93438 ||| || || ||||| ||||| || ||| | |||| | | ||||| ||||| | Sbjct 162986 TTGAAATCCGTTAAATCAAAATATCCAAATCTTGTTATTAGTTTAACACTTCCAACCTTA 163045 Query 93439 CCAACTGGTTTAACGGCTGTTGGATTAAAACTTGTCTCAAT-TTTTCaaaaa--aaTAAT 93495 |||||||||||||| || ||| || | | || | ||| |||||| | || | Sbjct 163046 CCAACTGGTTTAACAGCAACTGGTTT--ATCAAGTGTAAATGCCTTCAAAGATCAAGGA- 163102 Query 93496 TTTGATTTTGTGGTCAATGGTATGGCTATGGATTATTAT-----TCTCCGGAAGCAGCTT 93550 |||||||| || || ||||||||||| |||||||| ||| | ||||| | Sbjct 163103 TTTGATTTCGTTGTAAATGGTATGGCAATGGATTACTATGATGAACAATGGAAGGA---- 163158 Query 93551 TGGATATGGGTAAAGCTGCCGTTGAAGCAGCAAAAAGTATTGCATCTCAACTGGCTAAAG 93610 | | |||||| | ||||| || |||| ||| ||||||| | |||| ||||| Sbjct 163159 -GAAAATGGGTGATGCTGCAATTCAAGCTTCAACAAGTATTAAAGATCAA----TTAAAG 163213 Query 93611 ----TGTACCCATC------TGAACCATCTATATATTCTAAGGTAGGAATAACACCTATG 93660 | || |||| ||| | ||||| || || | ||| || || ||| Sbjct 163214 ACTCTTTATACATCTTTAAGTGATTCCCAATTATATGGAAAAGTTGCAATCACTCCAATG 163273 Query 93661 ATTGGTCTAAATGATGATTTATCAATGTTTAAATTAAAAGATGCTGCT-CTTTTAGGATC 93719 |||||| ||||||| ||| | ||||| | | | ||||||||| | |||| | Sbjct 163274 ATTGGTTTAAATGACGATCTTAGTATGTTCACTATTGATGATGCTGCTAGTGTTAGTA-A 163332 Query 93720 ATTCCAAAAATTAAACTTTATAGGTTTT---------TGGTCCTTCAATCGAGATAATCC 93770 ||| |||| |||| || ||||| ||| || ||||| |||||||| Sbjct 163333 ATTTGCCAAATCAAACCAAATGAGTTTTACTGCATCATGGGATTTGAATCGTGATAATCC 163392 Query 93771 ATCATCTTTGGGACATGTTGACCTACAAACAAGCAGTAATCCGGAACAAAAAGAAAGTGG 93830 ||| || || |||| || ||||||| ||||| || ||||| ||| ||| Sbjct 163393 ATCTTCATTCTCTTATGTAGATTTACAAACTTCTTCAAATCCAGATCAAAAGGAATCTGG 163452 Query 93831 TGAGTACACTATGACTTTTGT 93851 ||| || | || || ||||| Sbjct 163453 TGAATATTCAATAACATTTGT 163473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655271833573000