Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq160 113 4e-20 seq62 105 6e-18 seq6 95.1 1e-14 seq64 89.7 5e-13 seq224 84.2 2e-11 seq175 84.2 2e-11 >seq160 Length=80418 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||| | |||| |||||||||||||| ||||| | ||||| |||| Sbjct 3515 AAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCTGATAAAGTACGACCATCT 3456 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | |||||||| | | | |||| | ||||||||||| || || ||||||||||| Sbjct 3455 TCTAATTGTTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCT 3396 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||||||| ||| | | ||| | |||| | || ||||||| || | ||| Sbjct 3395 TGAATTTTTGCTTTAACATTTTCAATGTTATCAGAGCCTTCAACTTCGAGAGTAATGGTT 3336 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || ||||| | |||||| ||||| Sbjct 3335 TTACCAGTTAGTGTTTTAACGAAAATTTGCAT 3304 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||| | |||| |||||||||||||| || || | ||||| |||| Sbjct 3742 AAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAATCTGATAAAGTACGACCATCT 3683 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | || ||||| | | | |||| | ||||||||||| || || ||||||||||| Sbjct 3682 TCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG-ATACCTTCTTTATCT 3624 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||||||| || | | ||| | | |||| | || ||||| | || | ||| Sbjct 3623 TGAATTTTTGCCTTTACATTTTCAATATTATCAGAACCTTCAACTTCCAATGTGATGGTT 3564 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| | ||||| | |||||| ||||| Sbjct 3563 TTACCAGTTAAGGTTTTAACGAAAATTTGCAT 3532 >seq62 Length=176758 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | | | || |||||||||||||||||||| | ||||| |||||| Sbjct 76792 AACTAAATGGAGGGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTACGACCATCTTC 76733 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||||| | || ||||| ||||||||||| || ||||||||||| || Sbjct 76732 TAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATGCCTTCTTTGTCTTG 76673 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | || | |||| | || ||||| | || | ||||| Sbjct 76672 GATTTTGGCTTTAACATTCTCGATGTTATCAGAACCTTCAACTTCCAATGTGATTGTTTT 76613 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCATGACTTATTAGA 132134 |||||| |||||||| | ||||| ||||| | | | |||| Sbjct 76612 ACCAGTGAGAGTTTTAACAAAAATTTGCATAATTAAATAGA 76572 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | |||||||||||||||||||||| || | ||||| ||||| Sbjct 77020 AACTAAATGGAGAGTTGACTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCGTCTTC 76961 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||||| | || ||||| ||||||||||| || || |||||||| || Sbjct 76960 TAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTGTCTTG 76901 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | || | |||||| || ||||| | || | || || Sbjct 76900 GATTTTGGCTTTGACATTCTCGATGTTATCGGAACCTTCAACTTCTAATGTGATGGTCTT 76841 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| || ||||| | ||||| ||||| Sbjct 76840 ACCAGTGAGGGTTTTAACAAAAATTTGCAT 76811 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| ||||| | ||||||||||||||||||| || || | ||||| ||||| Sbjct 77476 AACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAATCAGAGAGAGTACGACCGTCTTC 77417 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||||| | |||||| | ||||||||||| || || |||||||| || Sbjct 77416 TAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTGTCTTG 77357 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| ||| | | || | |||||| || ||||| | || | || || Sbjct 77356 GATTTTGGCTTTGACATTCTCGATGTTATCGGAACCTTCAACTTCTAATGTGATGGTCTT 77297 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| || ||||| | ||||| ||||| Sbjct 77296 ACCAGTGAGGGTTTTAACAAAAATTTGCAT 77267 >seq6 Length=461532 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| || || | | |||| || ||||| ||||| || ||| | ||||| |||| Sbjct 390608 AAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGATAAAGTACGACCATCT 390667 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | |||||||||| | |||| ||||| ||||||||||| || || |||||||| || Sbjct 390668 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCT 390727 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||| || ||| | | ||| | | || | || ||||||| || | ||| Sbjct 390728 TGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACTTCGAGAGTGATGGTT 390787 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| | ||||| | ||| || ||||| Sbjct 390788 TTACCAGTTAAGGTTTTAACGAAGATTTGCAT 390819 >seq64 Length=175976 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||| | |||| ||||||||||| || || || | ||||| ||| Sbjct 78243 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTGAGAGAGTACGACCATCC 78302 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | ||||| || | | | || ||||| ||||| ||||| || || ||||||||||| Sbjct 78303 TCTAATTGTTTGCCAGCAAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT 78362 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||| ||| ||| | | ||| | | || | || ||||||| || | ||| Sbjct 78363 TGAATCTTTGCTTTGACATTTTCAATGTTGTCAGAACCTTCTACTTCGAGAGTAATGGTT 78422 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || |||||||| | |||||| ||||| Sbjct 78423 TTACCTGTGAGAGTTTTAACGAAAATTTGCAT 78454 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 ||||| ||||| | |||| ||||||||||| || || || | ||||| ||| Sbjct 77787 AAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTGAGAGAGTACGACCATCC 77846 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | |||||||| | | | || ||||| ||||| ||||| || || || |||||||| Sbjct 77847 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGGATACCCTCTTTATCT 77906 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 ||| ||| ||| | | ||| | | || | || ||||||| || | ||| Sbjct 77907 TGAATCTTTGCTTTGACATTTTCAATGTTGTCAGAACCTTCTACTTCGAGGGTAATGGTT 77966 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||| ||||||| ||||| ||||| Sbjct 77967 TTACCGGTCAAGGTTTTTACAAAAATTTGCAT 77998 >seq224 Length=37943 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| ||||||||||| ||||| || | ||||| ||||| | |||||||||| Sbjct 19978 TTGATTCTTTTTGAATATTGTAATCAGAAAGAGTACGACCGTCTTCTAATTGTTTACCGG 20037 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | | || ||||| ||||||||||| || || |||||||| || ||||| ||| | Sbjct 20038 CAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTAA 20097 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | |||| | || ||||| | || | ||||||||||| | |||| Sbjct 20098 CATTTTCAATGTTATCAGAACCTTCAACTTCTAAGGTAATAGTTTTACCAGTTAATGTTT 20157 Query 132108 TTATGAAAATCTGCATGACTTATT 132131 | | ||||| ||||| || ||| Sbjct 20158 TAACAAAAATTTGCATTGCTAATT 20181 >seq175 Length=69793 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || || ||||||||||||||||| | ||||| ||||| Sbjct 5114 ACCAAATGGAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGACCGTCTTCT 5173 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||||| | || ||||| ||||||||||| || || ||||||||||| | Sbjct 5174 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGA 5233 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | | | || | || ||||| | || | || ||| Sbjct 5234 ATCTTGGTCTTTACATTCTCGATATTGTCACTACCTTCAACTTCAAGAGTAATGGTCTTA 5293 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| | || || ||||| Sbjct 5294 CCAGTGAGAGTTTTAACAAAGATTTGCAT 5322 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | ||||| |||||||||||||| || | ||||| |||||| Sbjct 6026 ACCAAATGGAGAGTGGACTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCC 6085 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 | |||||||| | | || ||||| ||||| ||||| || || ||||| || || | Sbjct 6086 AATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGA 6145 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 ||||| ||| | | ||| | | | || | || ||||| | || | |||||| Sbjct 6146 ATTTTGGTTTTTACATTTTCAATATTGTCAGAACCTTCTACTTCTAAAGTAATGGTTTTA 6205 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| |||||||| | || || ||||| Sbjct 6206 CCAGTGAGAGTTTTAACAAAGATTTGCAT 6234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605260232920