Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq254 86.0 8e-12 >seq254 Length=21133 Score = 86.0 bits (94), Expect = 8e-12 Identities = 132/183 (72%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 185179 CATCAGGATATGAGAAACCTGTGTTGGTATCTGGTGCTGATGGTGTTGGAACTAAAATTA 185238 || |||||| | | | || | || ||||| ||| | ||||||||||| || ||| | | Sbjct 8893 CAGCAGGATTTAAAGATCCAATTTTAGTATCAGGTACAGATGGTGTTGGTACAAAATTAA 8952 Query 185239 ATAT--CTGTAGGA-TTGCTAATGATTACACCACTATTGGTCAGGATCTCGTTGCTATGT 185295 | || || || | ||| || | || | | ||||||| ||| | || || |||| Sbjct 8953 AGATTGCTCAAGAACTTGGTATTCATGA---TAGTATTGGTATCGATTTAGTGGCAATGT 9009 Query 185296 GCGTCAATGACGTTATATGTTC-TGGTGCTAAACCATTATATTTTCTAGATTATATTTCT 185354 | |||||||| ||| | ||||| |||||| |||||||||| ||| |||||||| || || Sbjct 9010 GTGTCAATGATGTTGT-TGTTCAAGGTGCTGAACCATTATACTTTTTAGATTATTTTGCT 9068 Query 185355 ACT 185357 ||| Sbjct 9069 ACT 9071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614609940328160