Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq103 156 6e-33 >seq103 Length=128160 Score = 156 bits (172), Expect = 6e-33 Identities = 366/550 (67%), Gaps = 2/550 (0%) Strand=Plus/Minus Query 161174 GAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATAT 161233 || || || || |||| ||||| |||||||| |||||||| ||||| |||| ||| Sbjct 27909 GAAATATATAATTTAGGAGCACAAAGTCATGTTAAAGTATCATTCGATATGTCTGAGTAT 27850 Query 161234 ACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGT 161293 || | | ||||| | | ||| || | ||||||| ||| ||||| || Sbjct 27849 ACTGGTGATGTTGATGGTTTAGGATGTCTTCGTTTATTGGATGCAATTCGTAGTTGTGG- 27791 Query 161294 ATGACAGATAGGGTCCGTAT-CTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACA 161352 || | ||| | | || |||||| || || ||| ||| || ||||| || || Sbjct 27790 ATTAGAGAAAAAAGTCAAATACTACCAAGCTTCAACCTCTGAATTATATGGTAAAGTTCA 27731 Query 161353 AGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAA 161412 ||||| ||||| ||| || || || ||||| ||||| || ||||| | || || || Sbjct 27730 AGAGATCCCACAATCAGAGACTACTCCATTCTATCCACGTTCACCATACGCTGTTGCAAA 27671 Query 161413 ACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAG 161472 || |||| ||||||||||||| ||||| | || || | || |||| ||| Sbjct 27670 ACAATATGCATATTGGATTGTAGTAAACTATCGTGAAGCATACGATATCTACGCATGTAA 27611 Query 161473 TGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532 ||||||| ||||||| |||||||||||||| | ||| || || ||||| | ||||| Sbjct 27610 TGGTATTTTATTCAATCATGAGTCACCACGTAGAGGTCCAACCTTTGTAACTAGAAAGAT 27551 Query 161533 TACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCT 161592 || | | | ||||| || | | || || ||| | |||||| | Sbjct 27550 CACCCGTTTCGTTGCTGGTATTGCATGTGGTAAAGATGAAATACTCTACTTGGGTAATAT 27491 Query 161593 AAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTT 161652 || | | ||| |||||||| |||||| ||| || || || || |||||||| ||||| Sbjct 27490 CAATGCCAAACGTGATTGGGGCCATGCTAGAGATTACGTCGAAGCAATGTGGTTAATGTT 27431 Query 161653 ACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTAAAGAGTATTCAGTGAAGGA 161712 |||||| || | || || || | || || ||||| ||| || ||||||| || Sbjct 27430 ACAACAAGAGAAACCAGAGGATTTCGTCATCGCCACTGGTGAAACTCATTCAGTACGTGA 27371 Query 161713 CTTTGTAGAG 161722 ||||| ||| Sbjct 27370 ATTTGTTGAG 27361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729920503252360