Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq139 89.7 4e-13 >seq139 Length=97671 Score = 89.7 bits (98), Expect = 4e-13 Identities = 209/314 (67%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGT--- 19605 || || ||||| || | ||||||||||| ||||| ||||| | |||||| | Sbjct 11124 TTACATATTATTATTTTCGATGAATTGGATGCAATTTGTAAATCTCGTGGTTCTAGACAA 11065 Query 19606 -GTAAAT--GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 || | | || || ||| | ||||| |||||| | | ||| | || |||||| Sbjct 11064 GGTGATTCAGGTGTTGGTGATTCAGTTGTAAATCAATTGTTAGCAATGATTGATGGTGTT 11005 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 | | |||||||||||||||| ||||| ||||| |||||| || | || || Sbjct 11004 GAATCATTGAATAATATTTTAGTCATTGGTATGACCAATAGAAAAGATATGATTGATGAA 10945 Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782 || ||| | || || ||||| |||||| || | | |||||| ||||| ||||| | Sbjct 10944 GCTTTACTTCGTCCAGGTCGTTTGGAAGTACATGTTGAAATTTCATTACCAGATGAGCAT 10885 Query 19783 GGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAAT 19842 || | | |||| || || || |||||| | | ||| || | | ||| ||| || Sbjct 10884 GGTAGAGAACAAATCTTTAAGATTCATACAGCTAAAATGAGAGATCAAAACGCTTTGGAT 10825 Query 19843 GACGATGTAGATCT 19856 | ||||| ||||| Sbjct 10824 AAAGATGTCGATCT 10811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397451170536985