Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq57 188 9e-43 seq203 84.2 3e-11 seq24 84.2 3e-11 seq608 82.4 9e-11 >seq57 Length=183543 Score = 188 bits (208), Expect = 9e-43 Identities = 1130/1778 (64%), Gaps = 68/1778 (4%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 || || |||||||| || ||||| | |||| |||||| | || | ||||||||| | Sbjct 134250 CGAAGATAGTACATACCAGTCTTTAAACCCTTCTTCCAAGAGTAGAAATGCATTGAAGTG 134309 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | || | | |||||| | ||||| | || | |||||| |||||||||||| Sbjct 134310 AGTTTTGCAAAGGTTGGTTCAGCGATGAAAACATTGAAACTTTGACTTTGATCGATGAAA 134369 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTCCT 118015 || ||||| || ||||||||||| | | | ||| | |||||||| || || | Sbjct 134370 GCACCACGATCAGCAGCCATATCAATGAGAGTTCTTTGAC-GAATTTCCCATACGGTTTT 134428 Query 118016 GTAGAGGTTCTT--AATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCC 118073 ||||| |||||| ||| |||||||| ||| | | || |||||| || |||| || Sbjct 134429 GTAGA-GTTCTTTCAAT-TCATCTGGAATACCACCAATCGATTGGATTGAACCACGTGCA 134486 Query 118074 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133 || || ||| |||||| || || ||| | || | || |||||||||||| Sbjct 134487 GCGATGATTTGATTCTTCATCTCTGGTGTCCAAATGCCCAACTCCATGAGATCCTCCAAC 134546 Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 118193 | || || ||||||| || ||||| || | | || | || || || | Sbjct 134547 AATTGTTTGTTGACAATTGTGAATTCACCAGCCAAGACACGACGACTGTAAATGTTTGAA 134606 Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 |||||||| |||||||| ||||| ||||| | |||||| || || || || ||||| Sbjct 134607 GTGTATGGTTCAAAGCATTCATTATTACCAAGGATTTGACTAGTTGAAGCGGTTGGCATT 134666 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGAC--CCTTT-TCCCTAATGCGTTCCTTGAGAGCG 118310 ||||| || | || ||||| |||| ||||| | || ||||| | || Sbjct 134667 GGTGCGATCAATAGTGAATTACGTAGACCACCTTTATTGACGATCTTATCCTTTAATTCG 134726 Query 118311 TCCC-AGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 118369 |||| | || | ||| ||| || | | | |||||||||||| ||||| ||||||| Sbjct 134727 TCCCAATTCCAACGTGAACTTGGTGT-AACATTCCACATATCAAATTGGAGAATACCTTT 134785 Query 118370 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC-GGAGC 118428 ||| ||||| || || | || ||||||||| ||| ||| | || ||||| ||| Sbjct 134786 GGATGCTGGGGAACCTTGGAAACTCTCATATGTGCCATCACGTACTGCTAATTCATGAG- 134844 Query 118429 TCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCT 118488 || | || ||| ||| || |||||| || | |||||| | || Sbjct 134845 AAGCTGTTAAAGCGGCGAAATAAATGGTTTCAGCGATTTCAACATTCAATTTAGATGCAG 134904 Query 118489 CGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGA 118548 | | ||| || | | || ||| || ||||| || | |||||| | ||| | Sbjct 134905 CAACACTATCGAATGGCATACGCATTTGAATGAAAACATCGGCCAAACCTTGAATACCAA 134964 Query 118549 GGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAAAATTC 118607 || ||||| |||||||| | ||| || | || ||| | || |||||||| || Sbjct 134965 TACCGATTGGACGATGTCTGAGATTCGAAGTTTTTGC-CTCTACAACAGGATAAAAGTTA 135023 Query 118608 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC----ATGAA--GC 118661 | |||||||| || |||||| |||| | ||| || || || | ||| | Sbjct 135024 CGATCGATAATAACGTTGAGATTTACAGTGATCAACTTGGTTATCTCAAAGAGGAATTGA 135083 Query 118662 TTTTCGTAATC----------AAAACTG-CGAGTCTCTTCATTGAC--AT--ACTTAGGA 118706 | ||| | || | ||| ||| || | ||||| || | || ||| Sbjct 135084 TGATCGAATTCCTTCTCTTTTGGATCTGTGGAGCCTGGTTTTTGACGAATGAATTTTGGA 135143 Query 118707 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC--CTTATCAGTGTACTCTATAA 118764 || || || || || |||||||| |||| | ||||| | || ||||| | || | Sbjct 135144 AGTGCAATAGAGGCAAGATTACATACAGCAATTTCATCAGGTGAT--GTGTATTGAATGA 135201 Query 118765 TTTCCGTGCACAAGTTTGAACT-CT--TAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 118821 | || || || ||| || ||| || | ||||| || | ||||||||||| || || | Sbjct 135202 TCTCAGTACA-AAGATT--ACTGCTACTGATGGTACCGAGATTCTTTTGATTGGATTTAG 135258 Query 118822 TGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 118881 || || |||||||| || | ||| |||| || || || || ||| |||| | || Sbjct 135259 CATTGCAAGCATCCTTATACAATATGAATGGTGTACCAGTTTCAACTTGTGACTCCATAA 135318 Query 118882 TAGCCTTCCAGACATCGGCAGC-----TGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTC 118936 | || ||| | || || | ||| || | | || | | | || Sbjct 135319 TTGCAAACCAAAGTTCTTGTGCCTTAATTACAC-GTCTTGGAAGATCTGGTGT-TGCTTC 135376 Query 118937 GTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT 118996 || ||| ||||||||| | ||| ||| | ||| ||||| |||||||||| Sbjct 135377 ATATTTTAAGTAGAGGGCACGATGCTCCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTC 135436 Query 118997 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGG 119056 || ||| || ||||| | ||| | |||| | ||||| || | ||| |||| || Sbjct 135437 ATTTGGACAAAAGAGTGCCCAATCACCATTTTGTTCAACACGTTCCATAAAGATATCACT 135496 Query 119057 GATCCAGAGCGCCGAGAAGAGATC-----CCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111 || |||||| || ||||||| || | || | |||||| | || || || Sbjct 135497 GACCCAGAGAGCGTAGAAGAGGTCTCTTGCTCTCATC--TCTTCTT--TACCAGTGTTTT 135552 Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171 | | || | ||| || | | ||| || ||||| || || | ||| || || | Sbjct 135553 TCTTG-AGATCAATAAACTCAAATACATCGGCATGCCATGGCTCTAAGTAGACGGCAAAG 135611 Query 119172 GACCCCTTAC---GACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGA 119228 | || || | || |||| | |||| ||||| | ||||| | || || |||||| Sbjct 135612 GCACCTTTTCTCTTACCACCACCTTGGTCAACATAACGTGCAGTATCATTGAAAACACGA 135671 Query 119229 AGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCT 119288 |||||||| | | ||| | | ||||| || || |||||| | | | ||| Sbjct 135672 AGCATTGGTACCAAACCGTTGCTAGTACCATTGGTACCACGAATATAACTTTGAGCGGCA 135731 Query 119289 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCC 119348 | | | ||||| | ||||||||||| || || | ||||||||| || || | Sbjct 135732 CGAATCTTGTGGACGGCAATACCAATACCACCAGCACTTTTTGAGATTAATGCACATTGT 135791 Query 119349 GTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTT-ATTTGCGATGAGGAAGCAGCT 119407 | | | ||||||| ||||| || ||||| |||| ||||| | | ||| || || Sbjct 135792 TTTAAGGTATCGTAGATACCATCTATTGAGTCCTCCTTCATTTG-AACCAAGAAACAACT 135850 Query 119408 CGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACAT 119467 ||||| || || |||||||| || ||||| | ||||| || || ||| |||||| Sbjct 135851 TGACATCTGTGGTGATGGTGTACCTGCATTGAACAAGGTTGGAGTAGCATGGGTGAACAA 135910 Query 119468 ACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527 || || | | | |||||| | | | | |||||||| || || ||||| Sbjct 135911 TTTCTGAGAGAGATGTTTGTAGGTGTTAATGGCACTATCGATGTCTTCACCATGGATACC 135970 Query 119528 GATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 119565 | ||||| ||||| ||||| | ||| || ||||| Sbjct 135971 TACAGAGACACGCATCAACATATGTTGTGGACGTTCCA 136008 >seq203 Length=49749 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACT 14293 || |||||||| ||||||||||||||||||| |||||| ||||| ||||||||||| | Sbjct 33588 TTGCCGACGGCATCAATTTCATCGATGAAAATGATACAAGGTTGTTTTTCACGGGCGGCA 33529 Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 14353 |||| | || || | | | ||| ||||| ||| | |||| ||||| || Sbjct 33528 GCAAACAACTCACGAATACGACGTGAACCAACACCTACATATTTCTCATCAAAACTGCTA 33469 Query 14354 GCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413 ||| | || ||||| || | ||||| || ||||||| || | || ||| Sbjct 33468 CCGGTGGTGTAGAGGAAGGAAACACCTGCCTCACCGGCAATGGCTCTTGCCAATAGAGTC 33409 Query 14414 TTCCCCGTCCCTGGTT 14429 || || || ||||||| Sbjct 33408 TTACCAGTACCTGGTT 33393 >seq24 Length=311718 Score = 84.2 bits (92), Expect = 3e-11 Identities = 195/287 (68%), Gaps = 19/287 (7%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG---CA 14209 || |||||||| ||| ||| |||||||| | || | || || |||||||||| || Sbjct 86576 AAACCATCCATTTCAACCAAAAGTTGATTTAATGTATTCTCACGCTCATCATTCGAACCA 86635 Query 14210 GGCATACCACCCGCACTGCGTTGCT-TACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 | | |||||| || | ||||| |||||| || ||||| ||||| |||||||| || Sbjct 86636 GAGAAACCACCTTTACCTC-TTGCTCTACCGATTGCATCAATCTCATCTATGAAAACAAT 86694 Query 14269 ACATGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTC-TCTTGGCACCGACAC 14327 || ||| || | | || |||||| | |||| || | | ||| ||| |||| Sbjct 86695 GCAAGGTGCGTTCTTTCTTGCTTGTTCAAATAATTCTCTAACACGTGATGG-ACCAACAC 86753 Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGGAA-CATTGG-----ATGAAGGGGACGTTAG 14381 | ||||||||||| || |||| | ||| || ||| | ||| || || || | Sbjct 86754 CAACAAACATCTCTACGAAAT------CTGAACCACTGGTTGAAAAGAATGGTACATTTG 86807 Query 14382 ATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 ||||||| ||| | ||| ||| | | || || || || |||||| Sbjct 86808 ATTCACCTGCGGTTGCTTTGGCAATCAATGTTTTACCGGTACCTGGT 86854 >seq608 Length=3544 Score = 82.4 bits (90), Expect = 9e-11 Identities = 200/296 (68%), Gaps = 9/296 (3%) Strand=Plus/Plus Query 14056 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 14115 ||| | |||||| || | |||||| || || | || || | || |||| | || || Sbjct 1731 GATTTGACGATCGAATCTACCTGGACGAAGTAATGCTGGATCTAAGACATCACTACGATT 1790 Query 14116 CGTCGCCGCGATGACAACGATGCCCG-TCTCGTTATCAAAGCCATCCATCTCAGTCAAGA 14174 || | |||| ||||| | |||| | | | | ||| ||||||||||| || | Sbjct 1791 GGTACCGGCGAATACAACCACACCCGATGTAGATGAGAAA-CCATCCATCTCTACTAATA 1849 Query 14175 GTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACC-CGCACTGCGTTGC 14233 ||||||| | || | || | |||||| || | | | |||||| || | |||| Sbjct 1850 GTTGATTCAATGTATTCTCTCTTTCATCGTT---ATGGAAACCACCACGTGATC--TTGC 1904 Query 14234 T-TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAAC 14292 | |||| || || || || ||||||||||| ||||| || ||| |||| |||| || | Sbjct 1905 TCTACCCACTGCATCGATCTCATCGATGAATACGATGCAAGGTGTATTTGCACGAGCCTC 1964 Query 14293 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 14348 || ||||| |||| || | | ||| ||||| ||||||||||| | |||| Sbjct 1965 TTTAAAGAGGTCTCTAACACGAGATGGACCTACACCAACAAACATCTCAATGAAAT 2020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427492751320