Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq57 300 2e-76 seq608 123 3e-23 seq24 104 3e-17 seq35 87.8 2e-12 >seq57 Length=183543 Score = 300 bits (332), Expect = 2e-76 Identities = 1160/1803 (64%), Gaps = 62/1803 (3%) Strand=Plus/Minus Query 104186 TATCTTCAACGGCTCGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCATGCGCGTG 104245 |||||||| || | | |||| | ||||| ||||| | ||||| ||||| || Sbjct 136036 TATCTTCATCGTATTGGTGGTAAAATTGTGGAACGTCCACAACATATGTTGATGCGTGTC 135977 Query 104246 GCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCC 104305 | | ||||| ||||| |||||||| ||| || | | | || ||| | | | || Sbjct 135976 TCTGTAGGTATCCATGGTGAAGACATCGATAGTGCCATTAACACCTACAAACATCTCTCT 135917 Query 104306 CAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAA 104365 || |||||| || || || |||||| | |||||||| ||||||||| ||| || Sbjct 135916 CAGAAATTGTTCACCCATGCTACTCCAACCTTGTTCAATGCAGGTACACCATCACCACAG 135857 Query 104366 ATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACT 104425 ||||| ||||| ||| | | | |||||||||||||| | |||||||| | || Sbjct 135856 ATGTCAAGTTGTTTCTTGGTTCAAATGAAGGAGGACTCAATAGATGGTATCTACGATACC 135797 Query 104426 CTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGAT 104485 | | | ||||| ||||||||| | ||||| |||||||| || | |||| | Sbjct 135796 TTAAAACAATGTGCATTAATCTCAAAAAGTGCTGGTGGTATTGGTATTGCCGTCCACAAG 135737 Query 104486 GTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGT-CAATCAGATGGTATTATTCC 104544 | | ||| | || | |||||| || || |||||| | | || | ||| | | || Sbjct 135736 ATTCGTGCCGCTCAAAGTTATATTCGTGGTACCAATGGTACTAGCA-ACGGTTTGGTACC 135678 Query 104545 AATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTC---GAAA 104601 ||||||||| || || || | || || || ||||| | |||| ||| || |||| Sbjct 135677 AATGCTTCGTGTTTTCAATGATACTGCACGTTATGTTGACCAAGGTGGTGGTAAGAGAAA 135618 Query 104602 GGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTT 104661 || | | || ||||| | ||||||||||| || ||| | | ||||| |||| Sbjct 135617 AGGTGCCTTTGCCGTCTACTTAGAGCCATGGCATGCCGATGTATTTGAGTTTATTGA--- 135561 Query 104662 GCGTCTCAACCAA------GGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCT 104715 |||||| || ||| | || ||| | | | || ||||||| |||||| Sbjct 135560 ---TCTCAAGAAAAACACTGGTAAAGAAGAGATGAGAGCAAGAGACCTCTTCTACGCTCT 135504 Query 104716 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 104775 |||| | ||| |||| ||| | | ||||| | | ||| ||||| | |||||||| Sbjct 135503 CTGGGTCAGTGATATCTTTATGGAACGTGTTGAACAAAATGGTGATTGGGCACTCTTTTG 135444 Query 104776 TCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACAC 104835 |||| | ||||||| |||||||| || | ||||||| | ||||| ||| Sbjct 135443 TCCAAATGAGGCACCAGGTCTCTCTGAGACTCACTCTGAGGAGCATCGTGCCCTCTACTT 135384 Query 104836 AAAGTACGAGG-AAGA--AGGTCGGGCGACTGCGACGGTGCCA-----GCTGCCGATGTG 104887 ||| || || | || | || || | | |||| || | || || | Sbjct 135383 AAAATATGAAGCAACACCAGATCTTCCAA----GACG-TGTAATTAAGGCACAAGAACTT 135329 Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| || ||| | |||| ||| || ||||||||||||| ||| | || || || Sbjct 135328 TGGTTTGCAATTATGGAGTCACAAGTTGAAACTGGTACACCATTCATATTGTATAAGGAT 135269 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || || || || |||||||||||| | ||| |||| || ||||| ||| Sbjct 135268 GCTTGCAATGCTAAATCCAATCAAAAGAATCTCGGTACCATCAGTAGCAGTAATCTTTGT 135209 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || ||| | ||| ||| ||||| | ||||| ||||| || || || || Sbjct 135208 ACTGAGATCATTCAATACACATCACCTGATGAAATTGCTGTATGTAATCTTGCCTCTATT 135149 Query 105068 GCTCTCCCCAAGT--AT--GT---------GGATCCAGAGAC---AAAGACA-----TTT 105106 || || || || | || || || |||| ||| ||||| | || Sbjct 135148 GCACTTCCAAAATTCATTCGTCAAAAACCAGGCTCCACAGATCCAAAAGAGAAGGAATTC 135089 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 ||| || || ||| || | || || |||| ||| || ||| |||| Sbjct 135088 GATCATCAATTCCTCTTTGAGATAACCAAGTTGATCACTGTAAATCTCAACGTTATTATC 135029 Query 105167 GATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 ||| | || ||||| || |||| ||| || | || ||| | ||||| |||||||| Sbjct 135028 GATCGTAACTTTTATCCTGTTGTAGAG-GCAAAAACTTCGAATCTCAGACATCGTCCAAT 134970 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTC 105285 ||| | ||| |||| ||| | || ||||| ||||||| || |||| ||| Sbjct 134969 CGGTATTGGTATTCAAGGTTTGGCCGATGTTTTCATTCAAATGCGTATGCCATTCGATAG 134910 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 | | || || | |||| || ||| ||||| ||| ||||||| | Sbjct 134909 TGTTGCTGCATCTAAATTGAATGTTGAAATCGCTGAAACCATTTATTTCGCCGCTTTAAC 134850 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 || | || || |||| |||||| ||||||| | || | ||||| ||||| Sbjct 134849 AGCTTCTCATGAATTAGCAGTACGTGATGGCACATATGAGAGTTTCCAAGGTTCCCCAGC 134790 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACG--AC 105463 || |||| | || ||||||||||||||| || || | |||||| ||||| | | Sbjct 134789 ATCCAAAGGTATTCTCCAATTTGATATGTGG-AATGTTACACCAAG-TTCACGTTGGAAT 134732 Query 105464 TGGGAAGCTCTCAAGGA-ACG--CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 ||||| | | ||||| | | | |||| | ||||| ||||| || | || Sbjct 134731 TGGGACGAATTAAAGGATAAGATCGTCAATAAAGGTGGTCTACGTAATTCACTATTGATC 134672 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 || ||||||||||| || || || |||||| | ||||||||||||||||||||||| Sbjct 134671 GCACCAATGCCAACCGCTTCAACTAGTCAAATCCTTGGTAATAATGAATGCTTTGAACCA 134612 Query 105581 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAG 105640 ||||| | ||||| || | | | | || || || || ||||||||||| Sbjct 134611 TACACTTCAAACATTTACAGTCGTCGTGTCTTGGCTGGTGAATTCACAATTGTCAACAAA 134552 Query 105641 CATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATG 105700 || | |||| || |||| ||| | || | ||| | || |||||| ||| || Sbjct 134551 CAATTGTTGGAGGATCTCATGGAGTTGGGCATTTGGACACCAGAGATGAAGAATCAAATC 134492 Query 105701 GTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTG 105760 | || ||||||| || ||| |||| | ||||||| ||||| | || | | Sbjct 134491 ATCGCTGCACGTGGTTCAATCCAATCGATTGGTGGTATTCCAGATGAATTGAAAGAACTC 134432 Query 105761 TACCGCACAGTTTGGGAAATCAAGATGAAGGA-TGTCATTGACATGGCCGCAGATCGTGG 105819 ||| || || |||||||| | ||| | | ||||||| ||||| || |||||||| Sbjct 134431 TACAAAACCGTATGGGAAATTC-GTCAAAGAACTCTCATTGATATGGCTGCTGATCGTGG 134373 Query 105820 TCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879 | ||||| ||||||||||||||| | ||| | ||||| | ||||| | | || Sbjct 134372 TGCTTTCATCGATCAAAGTCAAAGTTTCAATGTTTTCATCGCTGAACCAACCTTTGCAAA 134313 Query 105880 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 105939 ||| |||| ||||| | ||| ||||||||||||| | || || || ||||| || || Sbjct 134312 ACTCACTTCAATGCATTTCTACTCTTGGAAGAAGGGTTTAAAGACTGGTATGTACTATCT 134253 Query 105940 CCG 105942 || Sbjct 134252 TCG 134250 >seq608 Length=3544 Score = 123 bits (136), Expect = 3e-23 Identities = 204/287 (71%), Gaps = 7/287 (2%) Strand=Plus/Plus Query 9517 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9576 ||| | |||||| || | |||||||||||| | || ||| | || |||| ||||| Sbjct 1731 GATTTGACGATCGAATCTACCTGGACGAAGTAATGCTGGATCTAAGACATCACTACGATT 1790 Query 9577 CGTCGCGGCGATGACAACAATACCTGTTTCATTATCA-AAACCATCCATCTCTGTCAAAA 9635 || |||||| ||||| | ||| | | | || | ||||||||||||||| || | Sbjct 1791 GGTACCGGCGAATACAACCACACCCGATGTAG-ATGAGAAACCATCCATCTCTACTAATA 1849 Query 9636 GTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCT 9695 |||| || | || | || | |||||| || ||| | ||||||| | ||||| Sbjct 1850 GTTGATTCAATGTATTCTCTCTTTCATCGTTA--TGGAA-ACCACCACGTGATC-TTGCT 1905 Query 9696 TT-CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 9754 | ||||| ||||| |||||||| ||||| |||||||| ||| |||| | ||||| || Sbjct 1906 CTACCCACTGCATCGATCTCATCGATGAATACGATGCAAGGTGTATTTGCACGAGCCTCT 1965 Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTC 9801 | |||||| || | ||||| | || ||||||||||||||||| Sbjct 1966 TTAAAGAGGTCTCTAACACGAGATGGACCTACACCAACAAACATCTC 2012 >seq24 Length=311718 Score = 104 bits (114), Expect = 3e-17 Identities = 280/423 (66%), Gaps = 19/423 (4%) Strand=Plus/Plus Query 9517 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9576 ||||| | ||| || | |||||| | ||| | || | ||| | |||||| | || Sbjct 86479 GATCTGTCTATCGAATCTACCTGGTCTAAGTAATGCTTTATCCAAGATATCGGGTCTGTT 86538 Query 9577 CGTCGCGGCGATGACAACAATACCTGTTTCATTA--TCAAAACCATCCATCTCTGTCAAA 9634 || || || | ||| || ||| | ||||| | | ||||||||||| || |||| Sbjct 86539 TGTGGCAGCCAAGACCAC--TACGTTTTTCAATGGTTTGAAACCATCCATTTCAACCAAA 86596 Query 9635 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCG---CTGGCATACCACCAGCACTGCGT 9691 ||||| || | || | || || |||||||||| | | | |||||| || | | Sbjct 86597 AGTTGATTTAATGTATTCTCACGCTCATCATTCGAACCAGAGAAACCACCTTTACCTC-T 86655 Query 9692 TGCTTTCCC-ACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGC 9750 |||| | || | |||||||||||||| ||||| || ||||| ||| || | | || Sbjct 86656 TGCTCTACCGATTGCATCAATCTCATCTATGAAAACAATGCAAGGTGCGTTCTTTCTTGC 86715 Query 9751 GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 9810 |||||| | || | ||||| | || ||||||||||||||||| || || | Sbjct 86716 TTGTTCAAATAATTCTCTAACACGTGATGGACCAACACCAACAAACATCTCTACGAAATC 86775 Query 9811 TGCGGCGGAACATTGG-----ATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCG 9865 | | | || ||| | ||| || ||||| |||||||| || | ||| ||| Sbjct 86776 T-----GAACCACTGGTTGAAAAGAATGGTACATTTGATTCACCTGCGGTTGCTTTGGCA 86830 Query 9866 AGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCG 9925 | | || ||||| |||||||| || | | || ||||||| ||||||||| || Sbjct 86831 ATCAATGTTTTACCGGTACCTGGTGGTCCAACCAAGATTGCACCTCTTGGAATCTTTGCT 86890 Query 9926 CCA 9928 ||| Sbjct 86891 CCA 86893 >seq35 Length=230046 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 9698 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 9757 ||||| | ||||||||||| ||||| || || |||||| ||| | | ||| ||||| Sbjct 19110 CCCACAGAGTCAATCTCATCGATGAATACAATACATGGTGAATTCTTTCTGGCGGCTTCA 19169 Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAA 9795 || ||||| |||||||| || || |||||||||||||| Sbjct 19170 AATAGATCACGTACACGTTTTGCTCCCACACCAACAAA 19207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253531112280