Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq22 150 8e-32 >seq22 Length=316226 Score = 150 bits (166), Expect = 8e-32 Identities = 339/502 (68%), Gaps = 13/502 (3%) Strand=Plus/Plus Query 64892 CCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAG 64951 ||||| |||||||| | | ||||||| ||||||||| ||||| ||||| |||| || Sbjct 101855 CCTGTACCAATACCGATGCAACCATTTACTAAAATCATTGGAATTATTGGAACATAGAAT 101914 Query 64952 ATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAA--ATGGCATCATCCTCTT 65009 | || | ||| | |||||||||| | | | | | ||| || | ||| || ||| Sbjct 101915 TTTGGTTGAACTTTTTTACCATCATCAACTACACA--TGAAAGGATTGGATCGTCATCTG 101972 Query 65010 TTGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATATATCTTTCGGATGCGT 65069 || | | | | || || | ||||||| || | |||||||||| | || Sbjct 101973 GATGATAGACTGCTCTGGTAATATCATTCAATCTTGTGTGAATATATCTTGCACTTGAAC 102032 Query 65070 GGTCTTGTCCAGTTCG---TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATAT 65126 |||| ||| | || || ||| | ||| ||| | |||| ||| |||| Sbjct 102033 AATCTTTACCACCTGCAATTCTAGTACCATAAGAACCTGCTGGATTCAATAGATTGATAT 102092 Query 65127 TGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCAC 65186 | |||||||||| ||| | || ||||| |||| || | || || |||||| || |||| Sbjct 102093 TATTTGAACCAACAAACTCTTGTGCCATACCGACGATGGTTGAATATAAACTTGCCTCAC 102152 Query 65187 CGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCG 65246 | ||||||||| | ||||||||||| ||||| ||| | |||||||| ||||| || | | Sbjct 102153 CATGATGATATGCAGAATGTTCAGAAACATAACCAATCAATTGAGCGACTTTAATCT-CT 102211 Query 65247 TTGTTAA--ATTCTTTTTAAATGCAGAATACAATATTTTCCGTAAACTAA-TTTTCAATC 65303 || |||| |||| || ||| || | | || | ||| || | || ||||||| | Sbjct 102212 TTCTTAAGGTTTCTCTTGAAA--CAAGAGAAAAGAGTTTTTCTATGCGAAGTTTTCAAAC 102269 Query 65304 CATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAATGTATGAATTCTT 65363 | |||| | ||| |||||| ||| |||||||| | ||||| || || || | Sbjct 102270 CGTCCACAATATTTGGAATGGATCTTTCACAATCGGCAATAGAGAACAATACCAACTCCT 102329 Query 65364 TGTTAATAAATTCTTCATATGA 65385 | || ||||| ||| |||||| Sbjct 102330 TATTGATAAAATCTGAATATGA 102351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235677136267050