Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq175 154 3e-32 seq62 143 6e-29 seq64 141 2e-28 seq6 138 3e-27 seq2 129 1e-24 seq160 89.7 1e-12 >seq175 Length=69793 Score = 154 bits (170), Expect = 3e-32 Identities = 166/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || ||||||||||| ||||| ||||| ||||| | ||| || | || Sbjct 6019 TCTGAGTACCAAATGGAGAGTGGACTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACC 6078 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || ||||| ||||| ||||||||||| || |||| |||||||| Sbjct 6079 ATCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTT 6138 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || ||| || ||||| || ||||||| | ||| || || | ||| || Sbjct 6139 GTCTTGAATTTTGGTTTTTACATTTTCAATATTGTCAGAACCTTCTACTTCTAAAGTAAT 6198 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 || || || |||||||| || ||||| | |||||| || Sbjct 6199 GGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCATTATA 6238 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || |||||||| |||||||| ||||| ||||| | | || | || Sbjct 5563 TCTAAGAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCGGATAATGTACGACC 5622 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| || || || ||||| || | | |||||||||||| || | ||||| || Sbjct 5623 ATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTT 5682 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || ||| |||||| ||||| || | || |||| ||||| ||||||||||| Sbjct 5683 GTCTTGAATTTTTGTTTTCACATTTTCAATATTATCTGAGCCCTCAACTTCGAGAGTGAT 5742 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || | ||||| ||||| | ||||| Sbjct 5743 GGTCTTACCAGTTAATGTCTTAACAAAGATTTGCAT 5778 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | |||||||| || || |||||||| |||||||| | | || | || Sbjct 5791 TCTGAGTACCAAATGAAGAGTTGATTCCTTTTGGATATTATAATCGGATAATGTACGGCC 5850 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| || || || ||||| ||||| ||||||||||| || |||| ||||| || Sbjct 5851 ATCCTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTT 5910 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || ||||| || || || |||||| ||||| | |||||| || ||||| || Sbjct 5911 ATCTTGAATCTTGGTCTTTACATTCTCGATGTTGTCACTACCTTCAACTTCAAGAGTAAT 5970 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || |||||||| || ||||| | ||||| Sbjct 5971 GGTCTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 6006 >seq62 Length=176758 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || | || ||||| ||||||||||| ||||| ||||| | || || Sbjct 77032 ACGAAGTCTAAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTGTAATCAGAGAGAGT 76973 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| | || || || ||||| ||||| |||||||| || || |||| || Sbjct 76972 ACGACCGTCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACC 76913 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| ||||| || ||| || || |||||| | || || | |||||| || | Sbjct 76912 TTCTTTGTCTTGGATTTTGGCTTTGACATTCTCGATGTTATCGGAACCTTCAACTTCTAA 76853 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| || || ||||| | ||||| Sbjct 76852 TGTGATGGTCTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 76811 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| ||||| | ||| |||||||| |||||||||||||| || || | || || | || Sbjct 77710 TCTAAGGACTAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 77651 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || ||||| ||||| |||||||| || || |||| ||||| || Sbjct 77650 GTCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTT 77591 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || ||| || || || || ||||| | ||||||||||||||| || Sbjct 77590 GTCTTGGATTTTGGCTTTGACATTCTCAATATTGTCACTACCTTCAACCTCGAGAGTAAT 77531 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || ||||| | ||||| Sbjct 77530 GGTTTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 77495 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| || || | || ||||| ||||||||||| ||||||||||| | || || Sbjct 77488 ACGAAGTCTAAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAATCAGAGAGAGT 77429 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || ||||| | || || || || ||||| | | |||||| || || |||| || Sbjct 77428 ACGACCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCTGGTGGAATACC 77369 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| ||||| || ||| || || |||||| | || || | |||||| || | Sbjct 77368 TTCTTTGTCTTGGATTTTGGCTTTGACATTCTCGATGTTATCGGAACCTTCAACTTCTAA 77309 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| || || ||||| | ||||| Sbjct 77308 TGTGATGGTCTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 77267 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || || | || || || || |||||||||||||| || || | || || | || Sbjct 77254 TCTAAGAACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGACC 77195 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| | || || || ||||| ||||| |||||||| || || |||| ||||| || Sbjct 77194 GTCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTT 77135 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || ||| || || || ||| ||||| | ||| || |||||||| || Sbjct 77134 GTCTTGGATTTTGGCTTTAACATTCTCAATGTTGTCACTACCTTCGACTTCGAGAGTAAT 77075 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || ||||| | ||||| Sbjct 77074 GGTTTTACCAGTGAGGGTTTTAACAAAAATTTGCAT 77039 >seq64 Length=175976 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | |||||||| || |||||||| || |||||||| | || || | || Sbjct 78239 TCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTGAGAGAGTACGACC 78298 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || | || ||||| || || ||||| ||||||||||| || || | ||||| || Sbjct 78299 ATCCTCTAATTGTTTGCCAGCAAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTT 78358 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || |||||| ||| || ||||| ||| ||||||| | ||| || |||||||| || Sbjct 78359 ATCTTGAATCTTTGCTTTGACATTTTCAATGTTGTCAGAACCTTCTACTTCGAGAGTAAT 78418 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| || || || | ||||| Sbjct 78419 GGTTTTACCTGTGAGAGTTTTAACGAAAATTTGCAT 78454 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | |||||||| || |||||||| || |||||||| | || || | || Sbjct 77783 TCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCTGAGAGAGTACGACC 77842 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || | || || || || || ||||| ||||||||||| || || | || || || Sbjct 77843 ATCCTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGGATACCCTCTTT 77902 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || |||||| ||| || ||||| ||| ||||||| | ||| || ||||| || || Sbjct 77903 ATCTTGAATCTTTGCTTTGACATTTTCAATGTTGTCAGAACCTTCTACTTCGAGGGTAAT 77962 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | || |||||||| | ||||| Sbjct 77963 GGTTTTACCGGTCAAGGTTTTTACAAAAATTTGCAT 77998 >seq6 Length=461532 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | ||| || || || || ||||||||||||||||| | | || | || Sbjct 390604 TCTTAAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGATAAAGTACGACC 390663 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || |||||||| |||||||| || || || | ||||| || Sbjct 390664 ATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTT 390723 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || ||||| ||| |||||||||||| |||| || | |||||| ||||||||||| Sbjct 390724 GTCTTGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACTTCGAGAGTGAT 390783 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || || || || | || || || || | ||||| || Sbjct 390784 GGTTTTACCAGTTAAGGTTTTAACGAAGATTTGCATCTT 390822 >seq2 Length=540591 Score = 129 bits (142), Expect = 1e-24 Identities = 142/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| ||||| || ||||||||||| || ||||| | ||||| | || Sbjct 31867 TCTTAAGACTAAGTGGAGAGTTGATTCTTTTTGGATATTGTAATCAGAGAGGGTACGACC 31808 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | || || || || ||||| | | |||||| || || || | ||||| || Sbjct 31807 ATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCTGGTGGGATACCTTCTTT 31748 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||| || ||| || ||||||||| | ||||| | |||||||||||| ||||| Sbjct 31747 ATCTTGGATTTTGGCTTTAACATTTTCGATGTTATCAGAACCTTCAACCTCGAGGGTGAT 31688 Query 211079 CGTCTTTCC 211087 ||||| || Sbjct 31687 GGTCTTACC 31679 >seq160 Length=80418 Score = 89.7 bits (98), Expect = 1e-12 Identities = 150/216 (69%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| || | |||||||| || |||||||| ||||||||||| | | || | || Sbjct 3746 TCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAATCTGATAAAGTACGACC 3687 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || || || || | | |||||| || || || | ||||| || Sbjct 3686 ATCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGATCTGGTGG-ATACCTTCTTT 3628 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || || || ||| || || ||||| || | ||||| | |||||| || | ||||| Sbjct 3627 ATCTTGAATTTTTGCCTTTACATTTTCAATATTATCAGAACCTTCAACTTCCAATGTGAT 3568 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || | || || || || | ||||| Sbjct 3567 GGTTTTACCAGTTAAGGTTTTAACGAAAATTTGCAT 3532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159137192919905