Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq57 259 7e-64 >seq57 Length=183543 Score = 259 bits (286), Expect = 7e-64 Identities = 1136/1778 (64%), Gaps = 66/1778 (4%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||| ||||||||||||||||| |||| |||| |||| |||||||||||| Sbjct 134247 GTACGAAGATAGTACATACCAGTCTTTAAACCCTTCTTCCAAGAGTAGAAATGCATTGAA 134306 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || ||||| | | | | || || || || || ||| | ||||||||||||||| Sbjct 134307 GTGAGTTTTGCAAAGGTTGGTTCAGCGATGAAAACATTGAAACTTTGACTTTGATCGATG 134366 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 ||||| || | |||||| ||||| | || | || ||||| |||||||||| | ||| Sbjct 134367 AAAGCACCACGATCAGCAGCCATATCAATGAGAGTTCTTTGACGAATTTCCCATACGGTT 134426 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTATT---TTGAATGGAACCACCATCT 77048 ||| | | || ||| | |||||||||| | | ||| || ||||||| | Sbjct 134427 TTGTAGAGTTCTTTCAATTCATCTGGAATACCACCAATCGATTGGATTGAACCACGTGCA 134486 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCT-CTCTGTTAAAAC-TCTAA 77106 | || ||| |||||| || || |||| ||| || ||| | | | | || || Sbjct 134487 GCGATGATTTGATTCTTCATCTCTGGTGTCCA-AATGCCCAACTCCATGAGATCCTCCAA 134545 Query 77107 GGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTAC 77166 | || || || ||| ||||| |||| ||| || | |||| ||||||| || Sbjct 134546 CAAT-TGTTTGTTGACAATTGTGAATTCACCAGCCAAGACACGACGACTGTAAATGTTTG 134604 Query 77167 TGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCA 77226 || |||||||| | ||||||| || || | |||||| ||| ||||| ||||||| Sbjct 134605 AAGTGTATGGTTCAAAGCATTCATTATTACCAAGGATTTGACTAGTTGAAGCGGTTGGCA 134664 Query 77227 TAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGA---TTTTATCTTTTAGAT 77283 | ||||| | ||||| ||| | |||||| | | ||| | ||||| |||| | Sbjct 134665 TTGGTGCGATCAATAGTGAATTACGTAGACCACCTTTATTGACGATCTTATCCTTTAATT 134724 Query 77284 ATTTCCAATCCCAAAGATCTGAA---GGTACAACATCCCAAAGATCGTATTGTAGAATTC 77340 | ||||| |||| | |||| ||| ||||| ||| | ||| |||| ||||| | Sbjct 134725 CGTCCCAATTCCAACG---TGAACTTGGTGTAACATTCCACATATCAAATTGGAGAATAC 134781 Query 77341 CGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCAC 77400 | || || || || | | | ||||| | || || | | |||| |||| Sbjct 134782 CTTTGGATGCTGGGGAACCTTGGAAACTCTCATATGTGCCATCACGTACTGCTAATTCAT 134841 Query 77401 AACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG-T 77459 | ||| || || || ||||||| ||||| || | ||| | || | | | Sbjct 134842 GAGAAGCTGTTAAAGCGGCGAAATAAATGGTTTCAGCGATTTCAACATTCA-ATTTAGAT 134900 Query 77460 GCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACT 77519 || ||| |||||| || || | | | |||| || |||| || || || |||| Sbjct 134901 GCAGCAACACTATCGAATGGCATACGCATTTGAATGAAAACATCGGCCAAACCTTGAATA 134960 Query 77520 CCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAA 77579 |||||||| || || | |||||| ||| ||| |||| || ||| || ||||||| | Sbjct 134961 CCAATACCGATTGGACGATGTCTGAGATTCGAAGTTTTTGCCTCTACAACAGGATAAAAG 135020 Query 77580 TTAATGTCTATAATTTTATTGAGATTTCTAA----CAACTACTTTAACCACGTCCTTTAG 77635 ||| || ||||| ||||||||| | ||||| ||| | || || Sbjct 135021 TTACGATCGATAATAACGTTGAGATTTACAGTGATCAACTTGGTTATC----TCAAAGAG 135076 Query 77636 TTTAAGAAAATCAAAT--CTTCC-------ATCTATA--------------ACAAAC--A 77670 || ||| ||| |||| |||| | || || | Sbjct 135077 GAATTGATGATCGAATTCCTTCTCTTTTGGATCTGTGGAGCCTGGTTTTTGACGAATGAA 135136 Query 77671 TGTTCAAAG--CTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728 | || ||| | ||||| || |||||||| || || | |||| || | ||||| Sbjct 135137 TTTTGGAAGTGCAATAGAGGCAAGATTACATACAGCAATTTCATCAGGTGATGTGTATTG 135196 Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788 || ||||| ||||| |||||||| | |||| || || ||||| | ||| ||| || Sbjct 135197 AATGATCTCAGTACAAAGATTACTGCTACTGATGGTACCGAGATTCTTTTGATTGGATTT 135256 Query 77789 TTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGAT 77848 |||||| | |||||||| | || || || || || ||||||| ||||| || || Sbjct 135257 AGCATTGCAAGCATCCTTATACAATATGAATGGTGTACCAGTTTCAACTTGTGACTCCAT 135316 Query 77849 AATAGATTTCCAGACGACTCTAGCTTTTATCATAGAT-TTGTA---TCGCCTCTCTCTTT 77904 ||| | ||| | || || || || | | | ||| | || | | ||| Sbjct 135317 AATTGCAAACCAAAGTTCTTGTGCCTTAATTACACGTCTTGGAAGATCTGGTGTTGCTT- 135375 Query 77905 CATATTG--AGTATATAGC-CGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGC 77961 |||||| |||| | || || | || || | ||| | || || Sbjct 135376 CATATTTTAAGTAGAGGGCACGATGC---TCCTCAGAGTGAGTCTCAGAGAGACCTGGTG 135432 Query 77962 ATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGAT 78021 |||||||| || | | || ||| ||||||| || | ||| |||| |||||||| || Sbjct 135433 CCTCATTTGGACAAAAGAGTGCCCAATCACCATTTTGTTCAACACGTTCCATAAAGATAT 135492 Query 78022 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCT 78081 || | ||| ||||| || || |||| | ||| ||||| || || || || | Sbjct 135493 CACTGACCCAGAGAGCGTAGAAGAGGTCTCTTGCTCTCATCTCTTCTTTACCAGTGTTTT 135552 Query 78082 TTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAA 78141 | || ||||| | |||||| | | ||| | ||||||||| |||| || | || | Sbjct 135553 TCTTGAGATCAATAAACTCAAATACATCGGCATGCCATGGCTCTAAGTAGACGGCAAAGG 135612 Query 78142 CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCA 78201 | || || ||| ||| || || || | ||| | || || | ||| |||| | | Sbjct 135613 CACCTTTTCTCTTACCACCACCTTGGTCAACATAACGTGCAGTATCATTGAAAACACGAA 135672 Query 78202 ACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGC 78261 |||||| | | |||||| || ||||| || ||| |||||||||| | || | Sbjct 135673 GCATTGGTACCAAACCGTTGCTAGTACCATTGGTACCACGAATATAACTTTGAGCGGCAC 135732 Query 78262 GAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTT 78321 |||| || | || || || || || || || | || || |||| || || ||| Sbjct 135733 GAATCTTGTGGACGGCAATACCAATACCACCAGCACTTTTTGAGATTAATGCACATTGTT 135792 Query 78322 TCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAG 78381 | || |||||||||||||| ||||| ||| ||| |||| | || | ||||| || | Sbjct 135793 TTAAGGTATCGTAGATACCATCTATTGAGTCCTCCTTCATTTGAACCAAGAAACAACTTG 135852 Query 78382 ACATTTGATGATGA-ACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440 |||| || || ||| || |||||||| || || || |||| ||||| || ||| || Sbjct 135853 ACATCTG-TGGTGATGGTGTACCTGCATTGAACAAGGTTGGAGTAGCATGGGTGAACAAT 135911 Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 || | ||| || | ||||| || | ||| || || ||||| ||| || ||| Sbjct 135912 TTCTGAGAGAGATGTTTGTAGGTGTTAATGGCACTATCGATGTCTTCACCATGGATACCT 135971 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538 || | ||||||||||||||||| || || | ||| || Sbjct 135972 ACAGAGACACGCATCAACATATGTTGTGGACGTTCCAC 136009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694660142690080