Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20firmibasis_20[genbank_20GCA_5F000277485.1_202012-07- 10] 997 sequences; 30,559,666 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq57 268 1e-66 >seq57 Length=183543 Score = 268 bits (296), Expect = 1e-66 Identities = 1163/1821 (64%), Gaps = 69/1821 (4%) Strand=Plus/Plus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| ||||| ||||| | | || ||||| ||||| ||||||||||||||||| | Sbjct 134212 CAACAGTGAATTGAATTGCATCGGCAGCTGGACGAGTACGAAGATAGTACATACCAGTCT 134271 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 ||| |||| |||| |||||||||||| || ||||| | | | | || || | Sbjct 134272 TTAAACCCTTCTTCCAAGAGTAGAAATGCATTGAAGTGAGTTTTGCAAAGGTTGGTTCAG 134331 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 | || || ||| | |||||||||||||||||||| || | |||||| ||||| | Sbjct 134332 CGATGAAAACATTGAAACTTTGACTTTGATCGATGAAAGCACCACGATCAGCAGCCATAT 134391 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 || | || ||||| |||||||||| | |||||| | | || ||| | ||||||| Sbjct 134392 CAATGAGAGTTCTTTGACGAATTTCCCATACGGTTTTGTAGAGTTCTTTCAATTCATCTG 134451 Query 75612 GAAGATTTGTATT---TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 ||| | | | ||| || || || | ||| || ||| |||||| ||||| Sbjct 134452 GAATACCACCAATCGATTGGATTGAACCACGTGCAGCGATGATTTGATTCTTCATCTCTG 134511 Query 75669 CATTCCACAATTTTCT-CTCGGTTAAAAC-TCTAAGGAGATGAGGATTAACAATTTGAAA 75726 |||| ||| | ||| | | | | || || | || || |||||| || Sbjct 134512 GTGTCCA-AATGCCCAACTCCATGAGATCCTCCAACAAT-TGTTTGTTGACAATTGTGAA 134569 Query 75727 TTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 75786 ||| |||| ||| || | ||| ||||||| || || |||||||| | ||||||| Sbjct 134570 TTCACCAGCCAAGACACGACGACTGTAAATGTTTGAAGTGTATGGTTCAAAGCATTCATT 134629 Query 75787 GTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 75846 || || | |||||| ||||||||| || ||||| ||||| | ||||| ||| | Sbjct 134630 ATTACCAAGGATTTGACTAGTTGAAGCGGTTGGCATTGGTGCGATCAATAGTGAATTACG 134689 Query 75847 GAGACCATGTGTTCTGA---TTTTATCTTTTAGATATTTCCAATCCCAAAG--ATCTGAT 75901 |||||| | | ||| | ||||| |||| | | ||||| |||| | | || | Sbjct 134690 TAGACCACCTTTATTGACGATCTTATCCTTTAATTCGTCCCAATTCCAACGTGAACT--T 134747 Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATAT 75961 ||| ||||| ||| | ||| |||| ||||| || ||| || || || | | Sbjct 134748 GGTGTAACATTCCACATATCAAATTGGAGAATACCTTTGGATGCTGGGGAACCTTGGAAA 134807 Query 75962 GTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAA 76021 | || || || || || | | |||| ||| | || ||| || || ||||| Sbjct 134808 CTCTCATATGTGCCATCACGTACTGCTAATTCATGAGAAGCTGTTAAAGCGGCGAAATAA 134867 Query 76022 ATTGTTTCGAAAATCTTCTTATTAAGATCTTGC-GCTTCAAGACTATCAAAAGGATAATG 76080 || ||||| || | ||| | || | | || ||| |||||| || || | | Sbjct 134868 ATGGTTTCAGCGATTTCAACATTCA-ATTTAGATGCAGCAACACTATCGAATGGCATACG 134926 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 | |||| || |||| || | || |||| |||||||| || || | |||||| Sbjct 134927 CATTTGAATGAAAACATCGGCCAAACCTTGAATACCAATACCGATTGGACGATGTCTGAG 134986 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 ||| ||| ||| || ||| || ||| ||| | ||| ||| ||||| |||||||| Sbjct 134987 ATTCGAAGTTTTTGCCTCTACAACAGGATAAAAGTTACGATCGATAATAACGTTGAGATT 135046 Query 76201 TC---TGA-CAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATT--------- 76247 | ||| ||||| ||| | || || || ||| |||| Sbjct 135047 TACAGTGATCAACTTGGTTATC----TCAAAGAGGAATTGATGATCGAATTCCTTCTCTT 135102 Query 76248 TTCCATCTATC--------------ACAAACATATT----AAGAGCTATAGATGCTAGAT 76289 || |||| | || || ||| ||| || ||||| || |||| Sbjct 135103 TTGGATCTGTGGAGCCTGGTTTTTGACGAATGAATTTTGGAAGTGCAATAGAGGCAAGAT 135162 Query 76290 TACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTAC 76349 |||| || || | |||| || | ||||| || ||||| || || |||||||| | Sbjct 135163 TACATACAGCAATTTCATCAGGTGATGTGTATTGAATGATCTCAGTACAAAGATTACTGC 135222 Query 76350 ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAA 76409 |||| || || ||||| | ||| ||| || || || | |||||||| | | Sbjct 135223 TACTGATGGTACCGAGATTCTTTTGATTGGATTTAGCATTGCAAGCATCCTTATACAATA 135282 Query 76410 CAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTT 76469 || || || |||||||||| ||||| || ||||| | ||| | || || | Sbjct 135283 TGAATGGTGTACCAGTTTCAACTTGTGACTCCATAATTGCAAACCAAAGTTCTTGTGCCT 135342 Query 76470 TTATTATAGAT-TTGTA---TCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAAT 76525 | |||| | | ||| | || | | ||| |||||| | || | | || Sbjct 135343 TAATTACACGTCTTGGAAGATCTGGTGTTGCTT-CATATTTTAAGTAGA---GGGCACGA 135398 Query 76526 TCATCTCCCCAAACA-----TCATCCAAACCAGGACATTCATTCGGACACATCAATGACC 76580 | |||| || | ||| | ||| || ||||| ||||| | | || || Sbjct 135399 TG--CTCCTCAGAGTGAGTCTCAGAGAGACCTGGTGCCTCATTTGGACAAAAGAGTGCCC 135456 Query 76581 ACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 76640 | ||||||| || | ||| |||| |||||||| |||| | ||| ||||| || | Sbjct 135457 AATCACCATTTTGTTCAACACGTTCCATAAAGATATCACTGACCCAGAGAGCGTAGAAGA 135516 Query 76641 GATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAA 76700 | |||| | ||| ||||| || || || || || || ||||| | ||||| | | Sbjct 135517 GGTCTCTTGCTCTCATCTCTTCTTTACCAGTGTTTTTCTTGAGATCAATAAACTCAAATA 135576 Query 76701 TATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCT 76760 ||| | ||||||||| |||| || | || | |||| || ||| ||| || | Sbjct 135577 CATCGGCATGCCATGGCTCTAAGTAGACGGCAAAGGCACCTTTTCTCTTACCACCACCTT 135636 Query 76761 GATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATG 76820 | || | ||| | ||||| | ||| |||| | | |||||| | | ||||| | Sbjct 135637 GGTCAACATAACGTGCAGTATCATTGAAAACACGAAGCATTGGTACCAAACCGTTGCTAG 135696 Query 76821 TACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTA 76880 ||||||| || ||| |||||||||| | |||||||| || | | | || | Sbjct 135697 TACCATTGGTACCACGAATATAACTTTGAGCGGCACGAATCTTGTGGACGGCAATACCAA 135756 Query 76881 TTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTA 76940 | || || || |||| ||||||| ||||| |||| || || || ||||| || |||| Sbjct 135757 TACCACCAGCACTTTTTGAGATTAATGCACATTGTTTTAAGGTATCGTAGATACCATCTA 135816 Query 76941 TACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA-GTTCCT 76999 | || ||| |||| | || | ||||| || ||||| || || ||| || ||| Sbjct 135817 TTGAGTCCTCCTTCATTTGAACCAAGAAACAACTTGACATCTG-TGGTGATGGTGTACCT 135875 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| ||||| || |||| ||||| |||||| |||| | ||| || | ||||| || Sbjct 135876 GCATTGAACAAGGTTGGAGTAGCATGGGTGAACAATTTCTGAGAGAGATGTTTGTAGGTG 135935 Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119 | ||| | || || || ||| || ||||||| |||||||||||||||||| Sbjct 135936 TTAATGGCACTATCGATGTCTTCACCATGGATACCTACAGAGACACGCATCAACATATGT 135995 Query 77120 TGAGGTCGTTCTACAGTCTTA 77140 || || ||||| ||| | ||| Sbjct 135996 TGTGGACGTTCCACAATTTTA 136016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925515055040