Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq268 159 5e-34 seq356 134 2e-26 seq52 132 7e-26 seq140 129 9e-25 seq64 116 6e-21 seq1461 114 2e-20 seq89 114 2e-20 seq192 113 7e-20 seq312 111 2e-19 seq183 107 3e-18 >seq268 Length=24546 Score = 159 bits (176), Expect = 5e-34 Identities = 190/262 (73%), Gaps = 3/262 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||||||||| || ||||| | || ||||| ||| || ||||| |||||||| Sbjct 17379 CCACCACGAAGTCTTAAAACTAAATGAAGTGTTGATTCCTTTTGA-ATATTGTAATCTGA 17437 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || |||||||| |||||||| || |||||||| ||||| ||||| Sbjct 17438 TAAAGTACGACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGAGG 17497 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 ||||||||| |||| ||| | ||||||||| ||| || Sbjct 17498 AATTCCTTCCTTATTTTGAATTTTTGCTTTTACATTTTCAATATTATCTGAACCTTCAAC 17557 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTTATTAGAAAA 146289 ||| || || || ||||| || ||||| ||||||| || ||||||||||| || |||| Sbjct 17558 TTCAAGAGTTATGGTTTTTCCAGTTAAAGTTTTAACAAAAATTTGCATTTTTTTCTAAAA 17617 Query 146290 ATATTTG-TTaaaaaaaaTAAT 146310 ||| ||| ||| || |||||| Sbjct 17618 ATAGTTGAATAATAATAATAAT 17639 >seq356 Length=19801 Score = 134 bits (148), Expect = 2e-26 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || ||||| | ||| |||||||| ||||| ||||| || Sbjct 11359 CCACCTCTTAATCTTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTGTAATCAGAG 11418 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 11419 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGA 11478 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| || ||| ||| Sbjct 11479 ATACCTTCTTTATCTTGAATCTTTGCTTTAACATTTTCAATGTTATCGCTACCTTCAACT 11538 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||| |||||||||||||| | ||||||| || |||||||| Sbjct 11539 TCCAATGTAATTGTTTTACCTGTAAGAGTTTTAACAAAAATTTGCAT 11585 Score = 127 bits (140), Expect = 3e-24 Identities = 186/269 (69%), Gaps = 9/269 (3%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | || || || | ||| |||||||| || ||||||||||| Sbjct 11587 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTATAATCTGAT 11646 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| ||||||||||| ||||| ||||| |||||||| || || || ||| Sbjct 11647 AAGGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGA 11706 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| |||| ||| ||| Sbjct 11707 ATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATGTTATCAGAACCTTCAACT 11766 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTTATTAGAAAAA 146290 |||| ||||| ||||||||||| | ||||||| || |||||||| | ||| |||| Sbjct 11767 TCTAAAGTGATGGTTTTACCTGTAAGAGTTTTAACAAAAATTTGCATAT--TTAAAAAAT 11824 Query 146291 TATTTG----TTa---aaaaaaaTAATTA 146312 ||| || ||| ||| ||||||||| Sbjct 11825 TATATGAATATTAATGAAAGAAATAATTA 11853 Score = 120 bits (132), Expect = 5e-22 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||||| || ||||| | ||| ||||| || || ||||| || || Sbjct 11131 CCACCTCTGAGTCTTAGAACTAAATGAAGAGTTGATTCCTTTTGGATGTTATAGTCAGAG 11190 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || |||||||| ||||| ||||| | | ||| ||||| || || Sbjct 11191 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGG 11250 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| | |||| |||| ||| || Sbjct 11251 ATACCTTCTTTATCTTGGATCTTGGCTTTTACATTTTCGATATTATCAGAACCTTCAACC 11310 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||||||||| ||||| ||||||| || |||||||| Sbjct 11311 TCTAAGGTGATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCAT 11357 >seq52 Length=54870 Score = 132 bits (146), Expect = 7e-26 Identities = 191/276 (69%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| |||||||| | ||| |||||||| ||||||||||| || Sbjct 45462 CCACCTCTTAATCTTAAAACCAAATGGAGAGTGGATTCTTTTTGGATATTATAATCAGAG 45403 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || |||||||| ||||| ||||| | | ||| || || || ||| Sbjct 45402 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGA 45343 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| || ||| ||| Sbjct 45342 ATACCTTCTTTATCTTGAATTTTAGCTTTTACATTTTCAATGTTATCACTACCTTCAACT 45283 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTTATTAGAAAAA 146290 |||| || || |||||||| ||||||||||||| || ||||||||| || || Sbjct 45282 TCTAAGGTAATGGTTTTACCAGTTAATGTTTTAACAAAAATTTGCATTGTA----AATTT 45227 Query 146291 TATTTGTTaaaaaaaaTAATTACTAT-TCTTTATTT 146325 | ||| ||| | | || ||||| ||| | ||||||| Sbjct 45226 TTTTTTTTATATATAAAAATTATTATCTATTTATTT 45191 Score = 129 bits (142), Expect = 9e-25 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || ||||| | ||| |||||||| ||||| ||||| || Sbjct 45690 CCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAATCGGAG 45631 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| ||||| ||||| | | ||| || || || || Sbjct 45630 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGG 45571 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| | |||| |||| ||| || Sbjct 45570 ATACCTTCTTTATCTTGGATCTTGGCTTTTACATTTTCGATATTATCGGAACCTTCAACC 45511 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||||||||| ||||| ||||||| || |||||||| Sbjct 45510 TCTAAGGTGATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCAT 45464 Score = 111 bits (122), Expect = 2e-19 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || ||||| | ||| || ||||| || || ||||| || Sbjct 45918 CCACCTCTTAATCTTAAAACTAAATGGAGAGTGGACTCTTTTTGGATGTTGTAATCAGAG 45859 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| |||||||| || ||||| ||||| |||||||| || || || || Sbjct 45858 AGAGTACGACCATCTTCTAATTGCTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGG 45799 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| || ||| ||| Sbjct 45798 ATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATGTTATCGCTACCTTCAACT 45739 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| || || |||||||| ||||| ||||||| || |||||||| Sbjct 45738 TCTAAGGTAATGGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 45692 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| |||||||| | ||| ||||| || || ||||| || ||| Sbjct 46374 CCACCTCTTAATCTTAAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAGTCAGAA 46315 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| || |||||||| ||||| ||||| | | ||| ||||| || || Sbjct 46314 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGG 46255 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 46254 ATACCTTCTTTATCTTG 46238 Score = 102 bits (112), Expect = 1e-16 Identities = 154/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | || || || | ||| |||||||| || ||||| || || Sbjct 46146 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAG 46087 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| ||||| ||||| | | ||| ||||| || || Sbjct 46086 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGG 46027 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| || ||| ||| Sbjct 46026 ATACCTTCTTTATCTTGAATCTTGGCTTTGACGTTCTCAATGTTATCACTACCTTCAACT 45967 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||| ||||||||||| ||||| ||||||| || |||||||| Sbjct 45966 TCCAATGTAATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 45920 >seq140 Length=35707 Score = 129 bits (142), Expect = 9e-25 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | || || || | ||| |||||||| || || ||||| ||| Sbjct 25322 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 25381 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| ||||| ||||| |||||||| ||||| || || Sbjct 25382 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGG 25441 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| | |||| |||| || || Sbjct 25442 ATACCTTCTTTATCTTGGATCTTGGCTTTTACATTTTCGATATTATCAGAACCCTCAACC 25501 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||| |||||||||||||| ||||| ||||||| || |||||||| Sbjct 25502 TCTAAGGTGATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 25548 Score = 120 bits (132), Expect = 5e-22 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| | || ||||| | ||||||||| ||| || || |||||||| || Sbjct 25778 CCACCTCTTAATCTAAGAACTAAATGGAGAGTAGATTCCTTTTGA-ATGTTATAATCAGA 25836 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 |||||| | | ||| ||||||||||| || ||||| || | | ||| || || || || Sbjct 25837 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGG 25896 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 || |||||||| ||||| |||| |||| ||| || Sbjct 25897 GATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTATCGGAACCTTCGAC 25956 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| ||||||||||||||| || | ||||||| ||| |||||||| Sbjct 25957 TTCTAATGTGATTGTTTTACCAGTGAGAGTTTTAACGAAGATTTGCAT 26004 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | || ||||| | ||| |||||||| || || ||||| ||| Sbjct 26006 CCACCTCTTAATCTAAGAACTAAATGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 26065 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| ||||| ||||| |||||||| || || || ||| Sbjct 26066 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGA 26125 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| ||||| Sbjct 26126 ATACCTTCTTTGTCTTG 26142 Score = 102 bits (112), Expect = 1e-16 Identities = 156/228 (68%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| | || ||||| | ||| ||||| ||| || || |||||||| || Sbjct 25094 CCACCTCTTAATCTAAGAACTAAATGGAGAGTGGATTCCTTTTGA-ATGTTATAATCAGA 25152 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 |||||| | | ||| ||||||||||| || ||||| || | | ||| || || || || Sbjct 25153 AAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGG 25212 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 || |||||||| ||||| | || || ||| || Sbjct 25213 GATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTGTCACTACCTTCAAC 25272 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||| ||||| ||||||||||| ||||| ||||||| || |||||||| Sbjct 25273 TTCAAGTGTAATTGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 25320 >seq64 Length=50952 Score = 116 bits (128), Expect = 6e-21 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || ||||| | ||| |||||||| || ||||| || || Sbjct 24284 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCAGAG 24343 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| |||||||| || | | ||| ||||| || ||| Sbjct 24344 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAGATGAGACGTTGTTGATCTGGTGGA 24403 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| || ||| ||| Sbjct 24404 ATACCTTCTTTATCTTGAATTTTGGCTTTTACATTTTCAATGTTATCACTACCTTCAACT 24463 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | || ||||||||||| ||||| ||||||| || |||||||| Sbjct 24464 TCCAAAGTAATTGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 24510 Score = 111 bits (122), Expect = 2e-19 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| |||||||| | ||| ||||| || || ||||| || || Sbjct 24056 CCACCTCTTAATCTTAAAACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAGTCGGAG 24115 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | ||| ||||||||||| ||||| ||||| | | ||| ||||| || || Sbjct 24116 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGG 24175 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||||||||| |||| | ||| ||| Sbjct 24176 ATACCTTCTTTATCTTGGATCTTGGCTTTGACATTCTCAATGTTATCACTGCCTTCAACT 24235 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||| ||||||||||| ||||| ||||||| || |||||||| Sbjct 24236 TCCAATGTAATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 24282 Score = 95.1 bits (104), Expect = 2e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || ||||| | ||| |||||||| || ||||| || || Sbjct 24512 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCAGAG 24571 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGAT 146162 ||||| | | ||| ||||||||||| ||||| ||||| |||||||| |||| Sbjct 24572 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGAT 24623 >seq1461 Length=5937 Score = 114 bits (126), Expect = 2e-20 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| | ||| | || ||||| | || ||||| ||| || || || ||||| || Sbjct 4348 CCACCTCTTAATCTAAGGACTAAATGGAGGGTGGATTCCTTTTGA-ATGTTGTAATCAGA 4290 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||||| | | ||| || |||||||| ||||| |||||||||||||| || || || || Sbjct 4289 GAGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 4230 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 || |||||||| ||||| | ||||||| | || || Sbjct 4229 GATACCTTCTTTGTCTTGAATTTTTGTTTTAACATTTTCAATATTATCTGAGCCCTCAAC 4170 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||| || ||||| || ||||| ||||||||||||| || |||||||| Sbjct 4169 TTCAAGAGTGATGGTCTTACCAGTTAATGTTTTAACAAAGATTTGCAT 4122 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| | ||| | ||| ||||| | ||| ||||| || ||||| ||||| | Sbjct 4806 TTCCACCTCTTAATCTGAGTACTAAATGGAGAGTTGATTCCTTTTGGATATTGTAATCAG 4747 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||| | | ||| ||||||||||| ||||||||||| | | ||| ||||| || | Sbjct 4746 AAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGATCTGGTG 4687 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || ||||| || ||||| Sbjct 4686 GGATACCTTCCTTGTCTTG 4668 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | |||||| || | ||| |||||||| ||||| ||||| || Sbjct 4120 CCACCTCTTAATCTAAGTACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCGGAT 4061 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| ||||||||||| || || ||||| | | ||| ||||| || || Sbjct 4060 AATGTACGACCATCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCTGGTGGG 4001 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| |||||||| Sbjct 4000 ATACCTTCCTTATCTTG 3984 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| | ||| ||||| | ||| ||||| || || || ||||| ||| Sbjct 3892 CCACCTCTTAATCTGAGTACTAAATGGAGAGTGGATTCCTTTTGGATGTTGTAATCAGAA 3833 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | | || ||||||||||| ||||| ||||| | | ||| || || || || Sbjct 3832 AGAGTACGACCGTCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGG 3773 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 3772 ATACCTTCCTTGTCTTG 3756 >seq89 Length=43963 Score = 114 bits (126), Expect = 2e-20 Identities = 196/290 (68%), Gaps = 3/290 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || || || | || ||||| || || |||||||| || Sbjct 14336 CCACCTCTTAATCTTAAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGAT 14277 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | ||| ||||||||||| || ||||| || | | ||| ||||| || || Sbjct 14276 AAAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGG 14217 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || |||||||| ||||| | ||||||| ||| ||| Sbjct 14216 ATACCTTCTTTGTCTTGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACT 14157 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT-TTTATTAGAAAA 146289 || || ||||| |||||||| ||||| ||||||| ||| |||||||| || || | | Sbjct 14156 TCGAGAGTGATGGTTTTACCAGTTAAGGTTTTAACGAAGATTTGCATCTTGATCTGTCTA 14097 Query 146290 ATATTTGTTaaaaaaaaTAATTACTATTCTTTATTTTCTGTTTCTATTTT 146339 | ||| || |||| | |||| ||| ||| ||||| ||||| |||| Sbjct 14096 TTGTTTATTTAAAATTAATATTAATAT--TTTTTTTTCCTTTTCTTTTTT 14049 >seq192 Length=29408 Score = 113 bits (124), Expect = 7e-20 Identities = 222/325 (68%), Gaps = 5/325 (2%) Strand=Plus/Minus Query 209089 ACACGGATTTCATGTTCATGAATATGGTGATGTGAGTAATGGTTGTACATCAGCAGGAGA 209148 ||| ||||||||||||||||||| ||| ||| | ||||| |||| ||||||||||| Sbjct 21545 ACATGGATTTCATGTTCATGAATTTGGAGATACAACCAATGGATGTATATCAGCAGGAGC 21486 Query 209149 ACATTTTAATCCATATAATAGACAACATGGAGATATTAGTGATAAAATACATCGTCATGT 209208 || | ||||||| | || | | ||||||| | | |||| | | |||||||||| Sbjct 21485 TCACTATAATCCAGAGAAAAAAGAACATGGTGCACCAAATGATGAGA---ATCGTCATGT 21429 Query 209209 TGGTGATTTTGGTAATGTGTATGCAGACGAAAATGGCGTTGCTAATATTGATTTTCACGA 209268 ||||||||| |||||| | | | | || || | || || | | || Sbjct 21428 TGGTGATTTAGGTAATATAGAATCTAATAAAGATAAAAAATCAAACATAAACATAACAGA 21369 Query 209269 TGATATTATATCATTGTGTGGAACAAATAATATAATAGGAAGAACATTAGTAGTTCATGA 209328 | |||| || |||||| ||| | ||| |||| | || ||| || | || || ||||| Sbjct 21368 TAATATCATTACATTGTTTGGTCAACATAGTATAGTTGGTAGATCAATCGTTGTACATGA 21309 Query 209329 TTCGCCTGATGATTTAGGAAAAACTGAT-CACCCTTTGAGTAAAACAAGTGGTAATTCTG 209387 ||||||||||| | | | || |||| | ||||| || ||||||| ||| Sbjct 21308 AAAAGAAGATGATTTAGGTAGAGGTAATACACCAGAT-TCTAAAATAACTGGTAATGCTG 21250 Query 209388 GCGGAAGATTAGGTTGTGGTATTAT 209412 | | |||| | |||||||||||||| Sbjct 21249 GTGCAAGACTTGGTTGTGGTATTAT 21225 >seq312 Length=22109 Score = 111 bits (122), Expect = 2e-19 Identities = 190/271 (70%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 10427 AATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATT 10486 |||||| |||| |||| ||| | || || ||||| | |||||| || || || Sbjct 9224 AATTCCAGAAGGTACCTATGGTAGAATTGCACCAAGATCAGGTTTAGCATGGAAAAATTT 9165 Query 10487 TATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATT 10546 ||||| ||| ||||| || || ||| ||||||||||| ||||| || || | || Sbjct 9164 CATTGACTGTGGTGCTGGTGTTATCGACTCTGATTATAGAGGTAATGTTGGTGTCGTTTT 9105 Query 10547 ATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAAT 10606 ||| || ||||| |||| |||||| ||| || || |||||||| |||||||||| Sbjct 9104 ATTCAACCATTCAAATGTTGATTTTCCAATTGCTATTGGTGATAGAATCGCTCAATTAAT 9045 Query 10607 ATGTGAAAAAATT-TTATATCCTAAAATGTTAAAAGTCGAT--AGTTTATCAGAAACAAA 10663 | ||||| |||| ||| | || || || |||| ||| | || || ||||| | Sbjct 9044 CTTTGAAAGAATTGTTACA-CCAGAACCATTGGAAGTTGATGAAATTGAT--GAAACTCA 8988 Query 10664 AAGATCTGATTTTGGTTTTGGATCTACTGGT 10694 |||| || | ||||||||| || |||||| Sbjct 8987 AAGAGGTGCTGGTGGTTTTGGTTCAACTGGT 8957 >seq183 Length=30623 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | |||||| || || || | ||| |||||||| ||||| ||||| || Sbjct 20547 CCACCTCTTAATCTTAAGACTAAGTGGAGAGTTGATTCTTTTTGGATATTGTAATCAGAG 20488 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | || ||||||||||| || ||||| || |||||||| ||||| || || Sbjct 20487 AGGGTACGACCGTCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCTGGTGGG 20428 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 20427 ATACCTTCTTTATCTTG 20411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743497486117120