Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq140 136 9e-27 seq52 134 3e-26 seq356 131 4e-25 seq1461 129 1e-24 seq64 125 2e-23 seq183 118 3e-21 seq89 116 9e-21 >seq140 Length=35707 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | ||||| ||| |||||||||||| || || || | Sbjct 26006 CCACCTCTTAATCTAAGAACTAAATGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 26065 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || ||||| || | | ||||| ||| Sbjct 26066 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGA 26125 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || |||||||| ||||| ||||| || ||| || || ||| ||| Sbjct 26126 ATACCTTCTTTGTCTTGGATTTTAGCTTTTACGTTCTCGATATTGTCACTGCCTTCAACT 26185 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 ||||| ||||| || || || || ||||| || || || || |||||||| Sbjct 26186 TCGAGAGTGATGGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCATTAT 26235 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | ||| | || ||| ||||| || ||||| || | Sbjct 25778 CCACCTCTTAATCTAAGAACTAAATGGAGAGTAGATTCCTTTTGAATGTTATAATCAGAA 25837 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || || ||||| ||||| ||||| |||| Sbjct 25838 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGG 25897 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || |||||||| ||||| || ||||| || |||| ||| ||| Sbjct 25898 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTATCGGAACCTTCGACT 25957 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || || ||||| || ||||| || ||||| Sbjct 25958 TCTAATGTGATTGTTTTACCAGTGAGAGTTTTAACGAAGATTTGCAT 26004 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | ||| | ||| ||| ||||| || ||||| || | Sbjct 25094 CCACCTCTTAATCTAAGAACTAAATGGAGAGTGGATTCCTTTTGAATGTTATAATCAGAA 25153 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || || ||||| ||||| ||||| |||| Sbjct 25154 AGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGG 25213 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || |||||||| ||||| || ||||| || || || ||| ||| Sbjct 25214 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTGTCACTACCTTCAACT 25273 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || | ||| || || || || ||||| Sbjct 25274 TCAAGTGTAATTGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 25320 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | || | ||| |||||||||||| || || || | Sbjct 25550 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 25609 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| |||||||| || ||||| || ||||| ||||| |||| Sbjct 25610 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGG 25669 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || |||||||| ||||| || ||||| || ||| ||| ||| Sbjct 25670 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTATCAGAACCTTCAACT 25729 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || || | ||| || || || || ||||| Sbjct 25730 TCCAATGTGATTGTTTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 25776 Score = 98.7 bits (108), Expect = 2e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | || | ||| |||||||||||| || || || | Sbjct 25322 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAA 25381 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || ||||| || | | |||||| |||| Sbjct 25382 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGG 25441 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 || ||||||||||| ||||| || ||||| || ||||| ||| Sbjct 25442 ATACCTTCTTTATCTTGGATCTTGGCTTTTACATTTTCGATA 25483 >seq52 Length=54870 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | || | ||| |||||||||||| |||||||||| | Sbjct 46146 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGGATGTTATAGTCGGAG 46087 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || ||||| || ||||| |||||| |||| Sbjct 46086 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGG 46027 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| || || || ||||| ||||| || || ||| || ||| ||| Sbjct 46026 ATACCTTCTTTATCTTGAATCTTGGCTTTGACGTTCTCAATGTTATCACTACCTTCAACT 45967 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || || || || || | || || || || || ||||| Sbjct 45966 TCCAATGTAATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 45920 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| || |||| ||| || || || |||||||||||||| || ||||| Sbjct 45655 TTCTTTTTGGATATTGTAATCGGAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAA 45596 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| ||||| |||||| ||||||||||| ||||| || ||||| || || Sbjct 45595 AATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGGATCTTGGCTTTTACATT 45536 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| ||| |||| ||| || || | ||||| || || || || | || || || Sbjct 45535 TTCGATATTATCGGAACCTTCAACCTCTAAGGTGATTGTTTTACCAGTTAAGGTTTTAAC 45476 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 45475 AAAGATTTGCAT 45464 Score = 118 bits (130), Expect = 3e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||||||||| || | ||| || || || ||||| |||||||| || ||||| Sbjct 45427 TTCTTTTTGGATATTATAATCAGAGAGAGTACGACCATCTTCCAATTGTTTACCAGCGAA 45368 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| ||||| ||| || ||||||||||| || ||||| ||||| || || Sbjct 45367 AATGAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTTACATT 45308 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || ||| || ||| ||||| | || || || || || || | || || || Sbjct 45307 TTCAATGTTATCACTACCTTCAACTTCTAAGGTAATGGTTTTACCAGTTAATGTTTTAAC 45248 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 45247 AAAAATTTGCATT 45235 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| |||||||| | || || || || ||||| |||||||| || ||||| Sbjct 46339 TTCCTTTTGGATGTTATAGTCAGAAAGAGTACGACCATCTTCCAATTGTTTACCAGCGAA 46280 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| |||||| |||||| ||||||||||| ||||| || ||||| ||||| Sbjct 46279 AATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGGATCTTGGCTTTGACGTT 46220 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || ||| || ||| || || | || || || || || || | ||| || || Sbjct 46219 CTCAATGTTATCACTGCCTTCAACCTCCAAGGTAATTGTTTTACCAGTTAAAGTTTTAAC 46160 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 46159 AAAGATTTGCAT 46148 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| || || || | ||| || || || ||||||||||| || || ||||| Sbjct 45882 TCTTTTTGGATGTTGTAATCAGAGAGAGTACGACCATCTTCTAATTGCTTACCAGCGAAA 45823 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || | | ||||| |||||| ||||||||||| || ||||| ||||| || ||| Sbjct 45822 ATTAATCTTTGTTGGTCTGGTGGGATACCTTCTTTATCTTGAATTTTGGCTTTTACATTT 45763 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || |||||| ||| ||||| | || || || || || || | || || || Sbjct 45762 TCAATGTTATCGCTACCTTCAACTTCTAAGGTAATGGTTTTACCAGTTAAGGTTTTAACA 45703 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 45702 AAAATTTGCAT 45692 >seq356 Length=19801 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | |||||| || || | ||||| || ||| |||||||| |||||||| | | Sbjct 11131 CCACCTCTGAGTCTTAGAACTAAATGAAGAGTTGATTCCTTTTGGATGTTATAGTCAGAG 11190 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| |||||||| || ||||| || ||||| |||||| |||| Sbjct 11191 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGG 11250 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| ||||| || ||||| || ||||| ||| ||| ||| || Sbjct 11251 ATACCTTCTTTATCTTGGATCTTGGCTTTTACATTTTCGATATTATCAGAACCTTCAACC 11310 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || || | || || || || || ||||| Sbjct 11311 TCTAAGGTGATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCAT 11357 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| | || | ||||| ||| ||||||||||||||| || || | | Sbjct 11359 CCACCTCTTAATCTTAAAACTAAATGAAGAGTGGATTCTTTTTGGATATTGTAATCAGAG 11418 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || |||||||||||||| || ||||| || | | |||||| ||| Sbjct 11419 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGA 11478 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| || || || ||||| || ||||| || |||||| ||| ||| Sbjct 11479 ATACCTTCTTTATCTTGAATCTTTGCTTTAACATTTTCAATGTTATCGCTACCTTCAACT 11538 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || || || || || ||||| || || || || ||||| Sbjct 11539 TCCAATGTAATTGTTTTACCTGTAAGAGTTTTAACAAAAATTTGCAT 11585 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | |||||| || | || | ||| ||||||||| || ||||| || | Sbjct 11587 CCACCTCTTAATCTAAGAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTATAATCTGAT 11646 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || |||||||||||||| || ||||| || | | ||||| ||| Sbjct 11647 AAGGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGA 11706 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||||||||| || ||||| ||||| || ||||| || ||| ||| ||| Sbjct 11707 ATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATGTTATCAGAACCTTCAACT 11766 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || || ||||| || || || || ||||| Sbjct 11767 TCTAAAGTGATGGTTTTACCTGTAAGAGTTTTAACAAAAATTTGCAT 11813 >seq1461 Length=5937 Score = 129 bits (142), Expect = 1e-24 Identities = 170/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| ||||| | ||| | ||| ||| ||||| || || || || | | Sbjct 3664 CCACCTCTTAATCTGAGTACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAG 3605 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| |||||||| || ||||| || ||||| ||||| |||| Sbjct 3604 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGG 3545 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| || ||||| | ||| || ||||| ||| ||| ||||||| Sbjct 3544 ATACCTTCCTTATCTTGAATTTTGGTTTTTACATTTTCAATATTGTCGGAACCTTCTACT 3485 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATT 288482 ||||| || || || || || || ||||| || || || || |||||||| |||| Sbjct 3484 TCGAGAGTAATTGTTTTTCCAGTAAGAGTTTTAACAAAAATTTGCATTATAGTATT 3429 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||||||||| | |||| ||| ||||||||||||||| || |||| Sbjct 4120 CCACCTCTTAATCTAAGTACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCGGAT 4061 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || |||||||||||||| || ||||| || ||||| |||||| |||| Sbjct 4060 AATGTACGACCATCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCTGGTGGG 4001 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| || || || | || || || || || || || ||| ||| Sbjct 4000 ATACCTTCCTTATCTTGAATCTTTGTCTTTACATTCTCAATGTTGTCACTACCTTCAACT 3941 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || || || || || || || || || ||||| Sbjct 3940 TCGAGAGTAATAGTTTTACCAGTAAGGGTTTTAACAAAGATTTGCAT 3894 Score = 111 bits (122), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || |||||| | | ||| ||||| | ||| | || ||| ||||||||||| || || Sbjct 4808 ATTTCCACCTCTTAATCTGAGTACTAAATGGAGAGTTGATTCCTTTTGGATATTGTAATC 4749 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | || || || || |||||||||||||| || || || || ||||| |||||| Sbjct 4748 AGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGATCTGG 4689 Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||| ||||| || || || || || | || || || || || || || ||| Sbjct 4688 TGGGATACCTTCCTTGTCTTGAATCTTTGTCTTTACATTCTCAATGTTGTCACTACCTTC 4629 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || || ||||| || || ||||| || || || || ||||| Sbjct 4628 AACTTCGAGAGTAATGGTCTTACCAGTAAGAGTTTTAACAAAGATTTGCAT 4578 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | | ||| ||||| | ||| | ||| ||| |||||||| || || || | Sbjct 3892 CCACCTCTTAATCTGAGTACTAAATGGAGAGTGGATTCCTTTTGGATGTTGTAATCAGAA 3833 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||||||||||||||| || ||||| || ||||| ||||| |||| Sbjct 3832 AGAGTACGACCGTCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGG 3773 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || | || || || || || ||||| ||| ||| Sbjct 3772 ATACCTTCCTTGTCTTGAATCTTTGTCTTTACATTCTCGATGTTGTCGCTACCTTCAACT 3713 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || || || || || || || || || || || ||||| Sbjct 3712 TCTAAGGTAATGGTTTTACCAGTGAGTGTTTTAACAAAGATTTGCAT 3666 >seq64 Length=50952 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| |||||||||| ||| || || || |||||||||||||| || ||||| Sbjct 24091 TTCCTTTTGGATGTTATAGTCGGAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAA 24150 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| |||||| |||||| ||||||||||| ||||| || ||||| || || Sbjct 24151 AATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGGATCTTGGCTTTGACATT 24210 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || ||| || ||| ||||| | || || || || || || | || || || Sbjct 24211 CTCAATGTTATCACTGCCTTCAACTTCCAATGTAATTGTTTTACCAGTTAAGGTTTTAAC 24270 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 24271 AAAAATTTGCAT 24282 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || |||||||| | ||| || || || |||||||||||||| || || || Sbjct 24319 TTCTTTTTGAATGTTATAGTCAGAGAGAGTACGACCATCTTCTAATTGTTTACCAGCAAA 24378 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||| |||||| ||| || ||||||||||| || ||||| ||||| || || Sbjct 24379 GATGAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTGGCTTTTACATT 24438 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || ||| || ||| ||||| | || || || || || || | ||| || || Sbjct 24439 TTCAATGTTATCACTACCTTCAACTTCCAAAGTAATTGTTTTACCAGTTAAAGTTTTAAC 24498 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 24499 AAAAATTTGCAT 24510 >seq183 Length=30623 Score = 118 bits (130), Expect = 3e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||||||||| || || | ||| || || ||||||||||||||||| || || || Sbjct 20512 TTCTTTTTGGATATTGTAATCAGAGAGGGTACGACCGTCTTCTAATTGTTTACCGGCAAA 20453 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| |||||| ||||||||||| |||||||| ||||| || || Sbjct 20452 GATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGGATTTTGGCTTTAACATT 20393 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCC 288446 ||| || ||| ||| || ||||| ||||| ||||| || Sbjct 20392 TTCGATGTTATCAGAACCTTCAACCTCGAGGGTGATGGTCTTACC 20348 >seq89 Length=43963 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| ||||| |||| | || || || |||||||||||||| || || || Sbjct 14301 TTCCTTTTGGATGTTATAATCGGATAAAGTACGACCATCTTCTAATTGTTTACCGGCAAA 14242 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||| |||||| |||||| |||||||| || || || || ||||| ||||| Sbjct 14241 GATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTCTTGAATCTTGGCTTTGACGTT 14182 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || || ||| |||||||| ||||| || || || || | || || || Sbjct 14181 TTCGATGTTGTCTGAACCTTCAACTTCGAGAGTGATGGTTTTACCAGTTAAGGTTTTAAC 14122 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 14121 GAAGATTTGCAT 14110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179607379344258