Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2826 100 3e-16 >seq2826 Length=2534 Score = 100 bits (110), Expect = 3e-16 Identities = 202/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || || |||||||||||||| ||| || | || || ||||| || || ||||| Sbjct 1771 TATATTCGTGGTACCAATGGCACTAGCAATGGTTTGGTACCAATGCTTCGTGTTTTCAAT 1712 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 | | || || ||||| || || |||||||| | || |||||| | || || || || Sbjct 1711 GATACCGCTCGTTACGTCGATCAAGGTGGTGGCAAAAGAAAGGGTGCCTTTGCCGTATAC 1652 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC-GGCAA 94250 | ||||| ||||| || || || | || ||||| || | | | || ||| ||||| Sbjct 1651 TTGGAGCCATGGCATGCCGATGTCTTTGAGTTTATCGATCT-CAAGAAAAACACTGGCAA 1593 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | ||| || ||||| || ||||| || |||||||| || | |||||| | Sbjct 1592 GGAGGAGATGAGAGCTAGAGATCTATTCTATGCCCTCTGGGTTAGTGATATCTTTATGGA 1533 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 || ||||| |||| | ||| || |||||||| || ||| ||||| || Sbjct 1532 GCGTGTCGAACAAAATGGTGATTGGTCACTCTTTTGTCCAAACGAAGCACCCGGTCT 1476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494703961451560