Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq140 113 4e-20 seq64 111 2e-19 seq1461 107 2e-18 seq89 107 2e-18 seq268 89.7 5e-13 seq52 89.7 5e-13 seq356 86.0 6e-12 >seq140 Length=35707 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | || |||||||||||||| || || | |||||| || || Sbjct 25111 AACTAAATGGAGAGTGGATTCCTTTTGAATGTTATAATCAGAAAGAGTACGACCATCTTC 25170 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||||| | |||| ||||| |||||||| || || |||||||||||||| Sbjct 25171 TAATTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTG 25230 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| ||| | | ||| | | |||| | || || || | || | ||||| Sbjct 25231 GATTTTGGCTTTGACATTTTCAATGTTGTCACTACCTTCAACTTCAAGTGTAATTGTTTT 25290 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | |||||| ||||| || ||||| Sbjct 25291 ACCAGTTAAAGTTTTAACAAAGATTTGCAT 25320 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | || |||||||||||||| || || | |||||| || || Sbjct 25795 AACTAAATGGAGAGTAGATTCCTTTTGAATGTTATAATCAGAAAGAGTACGACCATCTTC 25854 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||||| | |||| ||||| |||||||| || || |||||||||||||| Sbjct 25855 TAATTGTTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTG 25914 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| ||| | | ||| | | | |||| || || || | || | ||||| Sbjct 25915 GATTTTGGCTTTGACATTTTCAATGTTATCGGAACCTTCGACTTCTAATGTGATTGTTTT 25974 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| |||||||| || || || ||||| Sbjct 25975 ACCAGTGAGAGTTTTAACGAAGATTTGCAT 26004 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | | || || ||||| |||||||| || | |||||| || || Sbjct 26023 AACTAAATGAAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTC 26082 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | |||| | |||||||| || || |||||||||||||| Sbjct 26083 TAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTCTTG 26142 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| ||||| | || | |||| | || || |||| || | ||||| Sbjct 26143 GATTTTAGCTTTTACGTTCTCGATATTGTCACTGCCTTCAACTTCGAGAGTGATGGTTTT 26202 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| |||||||| |||||||| ||||| Sbjct 26203 ACCAGTAAGAGTTTTAACAAAAATTTGCAT 26232 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 |||||| || | | || || ||||| |||||||| || | |||||| || || Sbjct 25567 AACTAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTC 25626 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | || ||||| |||||||| || || |||||||||||||| Sbjct 25627 CAATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCTTTGTCTTG 25686 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 |||||| ||| | | ||| | | | || | || || || | || | ||||| Sbjct 25687 GATTTTGGCTTTGACATTTTCAATGTTATCAGAACCTTCAACTTCCAATGTGATTGTTTT 25746 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | |||||| ||||| || ||||| Sbjct 25747 ACCAGTTAAAGTTTTAACAAAGATTTGCAT 25776 >seq64 Length=50952 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | |||| || ||||||||||| ||||| | |||||| || Sbjct 24299 AAAACTAAATGAAGAGTTGATTCTTTTTGAATGTTATAGTCAGAGAGAGTACGACCATCT 24358 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | |||| ||||| ||||| || || || ||||||||||| || Sbjct 24359 TCTAATTGTTTACCAGCAAAGATGAGACGTTGTTGATCTGGTGGAATACCTTCTTTATC- 24417 Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | ||| | | | || | || || || | || | || Sbjct 24418 TTGAATTTTGGCTTTTACATTTTCAATGTTATCACTACCTTCAACTTCCAAAGTAATTGT 24477 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| | |||||| |||||||| ||||| Sbjct 24478 TTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 24510 >seq1461 Length=5937 Score = 107 bits (118), Expect = 2e-18 Identities = 161/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | || ||||||||||||||||| || | |||||| || || Sbjct 3646 ACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCTTCC 3587 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | || ||||| |||||||| || || |||||||| || || || Sbjct 3586 AATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATC-TTG 3528 Query 138526 ATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||| | ||||| | ||| | |||||| || || |||| || | ||||| Sbjct 3527 AATTTTGGTTTTTACATTTTCAATATTGTCGGAACCTTCTACTTCGAGAGTAATTGTTTT 3468 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCATGGCTTATAATATTATT 138630 ||||| |||||||| |||||||| |||| ||||| |||| || Sbjct 3467 TCCAGTAAGAGTTTTAACAAAAATTTGCA----TTATAGTATTTTT 3426 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | || |||||||| |||||||| || | |||||| ||| || Sbjct 3874 ACTAAATGGAGAGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCT 3815 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | || ||||| |||||||| || || |||||||| ||||| || Sbjct 3814 AATTGTTTACCAGCGAAAATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCT-TG 3756 Query 138526 ATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | | ||||| |||| | || | | ||||| | || || || | || | ||||| Sbjct 3755 AATCTTTGTCTTTACATTCTCGATGTTGTCGCTACCTTCAACTTCTAAGGTAATGGTTTT 3696 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || ||||| ||||| || ||||| Sbjct 3695 ACCAGTGAGTGTTTTAACAAAGATTTGCAT 3666 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | | || ||||||||||||||||| || | |||||| || || Sbjct 4330 ACTAAATGGAGGGTGGATTCCTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCTTCC 4271 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | || | | |||||||| || || |||||||||||||| || Sbjct 4270 AATTGTTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGGATACCTTCTTTGTC-TTG 4212 Query 138526 ATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||||||||||| | ||| | | || | ||| || || | || | || || Sbjct 4211 AATTTTTGTTTTAACATTTTCAATATTATCTGAGCCCTCAACTTCAAGAGTGATGGTCTT 4152 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | ||||| ||||| || ||||| Sbjct 4151 ACCAGTTAATGTTTTAACAAAGATTTGCAT 4122 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||||||| | | || |||||||| |||||||| || | |||||| || || Sbjct 4558 ACTAAATGGAGAGTGGATTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCATCTTCC 4499 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||||| | || ||||| ||||| || || || |||||||| ||||| || Sbjct 4498 AATTGTTTACCGGCGAAAATGAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTC-TTG 4440 Query 138526 ATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 | |||| || |||| | || | | |||| | || || || | || | ||||| Sbjct 4439 AATTTTGGTCTTAACATTCTCAATGTTGTCACTACCTTCAACTTCTAAGGTAATGGTTTT 4380 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || ||||| || ||||| ||||| Sbjct 4379 ACCAGTGAGGGTTTTGACGAAAATTTGCAT 4350 >seq89 Length=43963 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 |||||||| || | | |||| |||||||| ||||| || ||| | |||||| || Sbjct 14321 AAAACTAAGTGGAGGGTTGATTCCTTTTGGATGTTATAATCGGATAAAGTACGACCATCT 14262 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||||| | |||| ||||| ||||| || || || |||||||||||||| Sbjct 14261 TCTAATTGTTTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTGTC- 14203 Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| | || | ||| | | ||| | | |||| | || || |||| || | || Sbjct 14202 TTGAATCTTGGCTTTGACGTTTTCGATGTTGTCTGAACCTTCAACTTCGAGAGTGATGGT 14143 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| | ||||| || || || ||||| Sbjct 14142 TTTACCAGTTAAGGTTTTAACGAAGATTTGCAT 14110 >seq268 Length=24546 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | |||| ||||||||||| ||||| || | |||||| || Sbjct 17394 AAAACTAAATGAAGTGTTGATTCCTTTTGAATATTGTAATCTGATAAAGTACGACCATCT 17453 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | |||||| | ||||| || ||||| || ||||| || | Sbjct 17454 TCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGAGGAATTCCTTCCTTAT-T 17512 Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||||| ||||| | ||| | | || | || || || | || | || Sbjct 17513 TTGAATTTTTGCTTTTACATTTTCAATATTATCTGAACCTTCAACTTCAAGAGTTATGGT 17572 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| ||||| | |||||| |||||||| ||||| Sbjct 17573 TTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 17605 >seq52 Length=54870 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | | || || ||||| || ||||| ||| | |||||| || Sbjct 45675 AAAACTAAATGGAGAGTGGATTCTTTTTGGATATTGTAATCGGAGAGAGTACGACCATCT 45616 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | || ||||| |||||||| || || ||||||||||| || Sbjct 45615 TCTAATTGTTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTATCT 45556 Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 ||| || ||||| | ||| | | |||| || ||||| | || | ||| Sbjct 45555 TGGATCTTGGCTTTTACATTTTCGATATTATCGGAACCTTCAACCTCTAAGGTGATTGTT 45496 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||||| | ||||| ||||| || ||||| Sbjct 45495 TTACCAGTTAAGGTTTTAACAAAGATTTGCAT 45464 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | | ||||| ||||| |||||||| || | |||||| || Sbjct 45903 AAAACTAAATGGAGAGTGGACTCTTTTTGGATGTTGTAATCAGAGAGAGTACGACCATCT 45844 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||| ||||| | | |||| | |||||||| || || ||||||||||| || Sbjct 45843 TCTAATTGCTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTTCTTTATCT 45784 Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||| | ||||| | ||| | | | ||| | || || || | || | || Sbjct 45783 -TGAATTTTGGCTTTTACATTTTCAATGTTATCGCTACCTTCAACTTCTAAGGTAATGGT 45725 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| | ||||| |||||||| ||||| Sbjct 45724 TTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 45692 >seq356 Length=19801 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||||||||| | |||| |||||||| ||||| ||||| | |||||| || || Sbjct 11148 AACTAAATGAAGAGTTGATTCCTTTTGGATGTTATAGTCAGAGAGAGTACGACCATCTTC 11207 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 | ||||||||| | | || ||||| ||||| || || || ||||||||||| || Sbjct 11208 CAATTGTTTACCAGCGAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTG 11267 Query 138525 GATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTT 138584 ||| || ||||| | ||| | | || | || ||||| | || | ||||| Sbjct 11268 GATCTTGGCTTTTACATTTTCGATATTATCAGAACCTTCAACCTCTAAGGTGATTGTTTT 11327 Query 138585 ACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| | ||||| ||||| || ||||| Sbjct 11328 ACCAGTTAAGGTTTTAACAAAGATTTGCAT 11357 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||| | | || || ||||| || ||||| || | |||||| || Sbjct 11374 AAAACTAAATGAAGAGTGGATTCTTTTTGGATATTGTAATCAGAGAGAGTACGACCATCT 11433 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | ||||||||| | | |||| | ||||| || || || ||||||||||| || Sbjct 11434 TCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGAATACCTTCTTTATC- 11492 Query 138523 GTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| | |||| ||||| | ||| | | | ||| | || || || | || | || Sbjct 11493 TTGAATCTTTGCTTTAACATTTTCAATGTTATCGCTACCTTCAACTTCCAATGTAATTGT 11552 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || |||||||| |||||||| ||||| Sbjct 11553 TTTACCTGTAAGAGTTTTAACAAAAATTTGCAT 11585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496243101595920