Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1461 93.3 5e-14 >seq1461 Length=5937 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| || || ||||| || |||| || | || || || ||||| Sbjct 3856 TCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCTAATTGTTTACCAGCGAAA 3797 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | | |||||||| ||||| |||| | || Sbjct 3796 ATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTGTCTTGAATCTTTGTCTTTACATTC 3737 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| ||| || || | || |||||||| || || || ||||||||| Sbjct 3736 TCGATGTTGTCGCTACCTTCAACTTCTAAGGTAATGGTTTTACCAGTGAGTGTTTTAACA 3677 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 3676 AAGATTTGCAT 3666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565216419291720