Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq429 102 9e-17 >seq429 Length=17259 Score = 102 bits (112), Expect = 9e-17 Identities = 147/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 66848 TTGTAGGCATCCATCGTGCCAGTTTTAAATACATTAATTACTCGTTTAGCACGATTTGGT 66907 ||||| | ||| | || || ||||| || ||| ||||||||| || ||||||||||| Sbjct 4904 TTGTAAGAATCAAGTGTTCCTGTTTTGAAAACACTAATTACTCTGTTTGCACGATTTGGA 4963 Query 66908 GTCTGTTTAAACCATTTAG-ATTGGGCAAGGTTC-AAAGCAGCTTGGTCCCACTGTTTTG 66965 || |||||| |||| ||| ||| || ||| ||| || | | ||||| |||| Sbjct 4964 GTTTGTTTATACCAAGTAGAATTTTTTAA--TTCTTCAGCGGCCTCATTCCACTTTTTTT 5021 Query 66966 CTTTAAGTAGTTTAATAGAGTTATTAAATCCAGCAACGCCAGCAACACCCATTTGGAATA 67025 ||| || || ||| | || || ||||| | ||| |||| |||||||||| |||| Sbjct 5022 CTTCAATTAATTTGAGTGACTTTTTAAAATTTGAAACACCAGTTGCACCCATTTGAAATA 5081 Query 67026 CCATATTCACTAAAGCCATTTGTC 67049 ||||||| |||| ||||||| || Sbjct 5082 CCATATTGGCTAATGCCATTTTTC 5105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540039798385640