Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2826 143 1e-29 >seq2826 Length=2534 Score = 143 bits (158), Expect = 1e-29 Identities = 185/253 (73%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 25889 TTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGA 25948 |||||||| || | ||||||| ||||||| || || ||||||||| | ||| | Sbjct 1491 TTTGGACAAAAGAGTGACCAATCACCATTTTGTTCGACACGCTCCATAAAGATATCACTA 1550 Query 25949 ATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTT 26007 | ||| | ||||| |||| |||||| |||||||| || || || || ||| || || || Sbjct 1551 ACCCAGAGGGCATAGAATAGATCTCTAGCTCTCATCTCCTCCTTGCCAGTGTTT-TTCTT 1609 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 ||||| | || ||||| | ||| | |||||||| || || || | ||||| ||| Sbjct 1610 GAGATCGATAAACTCAAAGACATCGGCATGCCATGGCTCCAAGTATACGGCAAAGGCACC 1669 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 |||||||| || ||||||||||| ||||| | || || ||||||||||| | ||| Sbjct 1670 CTTTCTTTTGCCACCACCTTGATCGACGTAACGAGCGGTATCATTGAAAACACGAAGCAT 1729 Query 26128 TGGAACTAATCCA 26140 ||| || || ||| Sbjct 1730 TGGTACCAAACCA 1742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253030405909325