Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq268 179 5e-40 seq52 178 2e-39 seq356 174 2e-38 seq64 159 5e-34 seq1461 154 2e-32 seq140 154 2e-32 seq89 145 1e-29 seq316 129 9e-25 seq183 123 4e-23 >seq268 Length=24546 Score = 179 bits (198), Expect = 5e-40 Identities = 180/231 (78%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 155809 atttatgtaataaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAG 155868 |||| | || ||||||||||| ||| ||||||| || ||||||||||| || || | | Sbjct 17619 ATTTTTAGAAAAAAATGCAAATTTTTGTTAAAACTTTAACTGGAAAAACCATAACTCTTG 17560 Query 155869 AAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCA 155928 |||| |||| ||| ||||||||| ||| || ||| ||||| ||| |||| ||||| | Sbjct 17559 AAGTTGAAGGTTCAGATAATATTGAAAATGTAAAAGCAAAAATTCAAAATAAGGAAGGAA 17500 Query 155929 TACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTT 155988 | |||||||| ||||||||||| || | ||| ||||| || | |||||| | |||| Sbjct 17499 TTCCTCCAGATCAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTT 17440 Query 155989 TATCAGATTATAATATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGA 156038 |||||||||| ||||| || |||| | | || ||||||||||| |||||| Sbjct 17439 TATCAGATTACAATAT-TCAAAAGGAATCAACACTTCATTTAGTTTTAAGA 17390 >seq52 Length=54870 Score = 178 bits (196), Expect = 2e-39 Identities = 225/303 (74%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 155751 AAATAATTGAAGATAAAATAATAG--AGAAACaataaagtatttattgtttata-ataaa 155807 ||| |||| || | ||| |||||| | ||| || | || | ||| |||||| ||||| Sbjct 45164 AAAAAATTCAAAACAAA-TAATAGTAATAAATAAATAGATAATAATT-TTTATATATAAA 45221 Query 155808 aatttatgtaataaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTA 155867 || | | || ||||||||| ||| |||||||||| ||||| ||||| ||||| ||| Sbjct 45222 AAAAAAAATT-TACAATGCAAATTTTTGTTAAAACATTAACTGGTAAAACCATTACCTTA 45280 Query 155868 GAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGC 155927 ||||| |||| | |||||| ||| ||| || ||| |||||| |||||||||||||| Sbjct 45281 GAAGTTGAAGGTAGTGATAACATTGAAAATGTAAAAGCTAAAATTCAAGATAAAGAAGGT 45340 Query 155928 ATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACT 155987 || || ||||| |||||| | | |||| || ||||| || | |||||| | ||| Sbjct 45341 ATTCCACCAGACCAACAACGTCTCATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACT 45400 Query 155988 TTATCAGATTATAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGC 156047 | || ||||||||||| ||||| | || || ||||| || |||||||||||||| Sbjct 45401 CTCTCTGATTATAATATCCAAAAAGAATCCACTCTCCATTTGGTTTTAAGATTAAGAGGT 45460 Query 156048 GGT 156050 ||| Sbjct 45461 GGT 45463 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| ||||| |||||||| |||| | Sbjct 45692 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACCATTACCTTAGAAGTTGAAGGTAGC 45751 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||| || ||| ||||| |||||||||||||| || || ||||| ||| Sbjct 45752 GATAACATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 45811 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||||| |||| || |||||||| | |||||| | ||| | || ||||| || Sbjct 45812 CAAAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTCGTACTCTCTCTGATTACAAC 45871 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || || |||||||| |||||||||||||| ||| Sbjct 45872 ATCCAAAAAGAGTCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGGT 45919 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| || || ||||| || |||| ||| Sbjct 45464 ATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTAGAGGTTGAAGGTTCC 45523 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||||||| ||| || ||| || || |||||||||||||| || || ||||| ||| Sbjct 45524 GATAATATCGAAAATGTAAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGACCAA 45583 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | |||||| | ||| | || ||||| ||| Sbjct 45584 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGATTACAAT 45643 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || |||||||| |||||||||||||| ||| Sbjct 45644 ATCCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGGT 45691 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| |||||||| ||||| |||| | | Sbjct 45920 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATTACATTGGAAGTTGAAGGTAGT 45979 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||||| ||| || || |||||||||||||| || || ||||| ||| Sbjct 45980 GATAACATTGAGAACGTCAAAGCCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 46039 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | |||||| | ||| | || || ||||| Sbjct 46040 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGACTATAAC 46099 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || ||||| | ||||||||||| ||| Sbjct 46100 ATCCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGGT 46147 Score = 136 bits (150), Expect = 6e-27 Identities = 176/240 (73%), Gaps = 5/240 (2%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| ||||| || || || |||| | Sbjct 46148 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACAATTACCTTGGAGGTTGAAGGCAGT 46207 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||||| ||| || || |||||||||||||| || || ||||| ||| Sbjct 46208 GATAACATTGAGAACGTCAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 46267 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | |||||| | ||| | || || |||| Sbjct 46268 CAACGTCTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGACTATA-- 46325 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAATTG 156059 | ||||||| || | || || ||||| || |||||||||||||| ||| | |||||| Sbjct 46326 ACATCCAAAAGGAATCCACTCTCCATTTGGTTTTAAGATTAAGAGGTGGTCTTTAAATTG 46385 >seq356 Length=19801 Score = 174 bits (192), Expect = 2e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155820 aaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| ||| ||||||| | || || ||||| || || |||||||| |||| | Sbjct 11816 AATATGCAAATTTTTGTTAAAACTCTTACAGGTAAAACCATCACTTTAGAAGTTGAAGGT 11757 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 |||||||| ||| ||| || ||| |||||| |||||||||||||| || || ||||| Sbjct 11756 TCTGATAACATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGAC 11697 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||||| |||| || ||||| || | |||||| | || |||||||||||| Sbjct 11696 CAACAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACCTTATCAGATTAT 11637 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||||| | || || || ||||| | ||||||||||| ||| Sbjct 11636 AACATTCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGGT 11586 Score = 163 bits (180), Expect = 4e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| | || || ||||| |||||||| ||||| |||| | Sbjct 11585 ATGCAAATTTTTGTTAAAACTCTTACAGGTAAAACAATTACATTGGAAGTTGAAGGTAGC 11526 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||| || ||| || || |||||||||||||| || || ||||| ||| Sbjct 11525 GATAACATTGAAAATGTTAAAGCAAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 11466 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||||| |||| || ||||| || | |||||| | ||| | || ||||| ||| Sbjct 11465 CAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTACAAT 11406 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||||||||| |||||||||||||| ||| Sbjct 11405 ATCCAAAAAGAATCCACTCTTCATTTAGTTTTAAGATTAAGAGGTGGT 11358 Score = 145 bits (160), Expect = 1e-29 Identities = 182/247 (74%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| || || ||||| || |||| |||| Sbjct 11357 ATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTAGAGGTTGAAGGTTCT 11298 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||||||| ||| || ||| || || |||||||||||||| || || ||||| ||| Sbjct 11297 GATAATATCGAAAATGTAAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 11238 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | |||||| | ||| | || || ||||| Sbjct 11237 CAACGTCTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTATAAC 11178 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAATT 156058 || ||||| || | || ||||||||||| ||||| | ||||| || | ||||| Sbjct 11177 AT--CCAAAAGGAATCAACTCTTCATTTAGTTCTAAGACTCAGAGGTGGTCTTTAAAAAA 11120 Query 156059 GAATAAT 156065 |||||| Sbjct 11119 TAATAAT 11113 >seq64 Length=50952 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| ||||| || ||||| |||| | | Sbjct 24510 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACAATTACTTTGGAAGTTGAAGGTAGT 24451 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||| || ||| ||||| |||||||||||||| || || ||||| ||| Sbjct 24450 GATAACATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 24391 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||| ||||| || | |||||| | ||| | || || ||||| Sbjct 24390 CAACGTCTCATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTATAAC 24331 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||||||||| |||||||||||||| ||| Sbjct 24330 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGGT 24283 Score = 140 bits (154), Expect = 5e-28 Identities = 177/240 (74%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| |||||||| ||||| |||| | Sbjct 24282 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATTACATTGGAAGTTGAAGGCAGT 24223 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| || || ||| || || |||||||||||||| || || ||||| ||| Sbjct 24222 GATAACATTGAGAATGTCAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 24163 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | |||||| | ||| | || || ||||| Sbjct 24162 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGACTATAAC 24103 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAATTG 156059 || ||||| || | || || ||||| || |||||||||||||| ||| | |||||| Sbjct 24102 AT--CCAAAAGGAATCCACTCTCCATTTGGTTTTAAGATTAAGAGGTGGTCTTTAAATTG 24045 >seq1461 Length=5937 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||||||||| ||||| || || || || | ||||| || | || Sbjct 4122 ATGCAAATCTTTGTTAAAACATTAACTGGTAAGACCATCACTCTTGAAGTTGAGGGCTCA 4181 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||||||| ||| || |||| ||||| ||||| |||||||| || || ||||| ||| Sbjct 4182 GATAATATTGAAAATGTTAAAACAAAAATTCAAGACAAAGAAGGTATCCCACCAGACCAA 4241 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| || ||||| || | |||||| | ||| | || ||||| || Sbjct 4242 CAAAGATTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGATTACAAC 4301 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| || | || || |||||||| | ||||||||||| ||| Sbjct 4302 AT-TCAAAAGGAATCCACCCTCCATTTAGTCCTTAGATTAAGAGGTGGT 4349 Score = 149 bits (164), Expect = 9e-31 Identities = 176/236 (75%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 155816 taataaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGA 155875 || || ||||||||| ||| ||||||| | ||||||||||| ||||| | ||||| || Sbjct 3431 TACTATAATGCAAATTTTTGTTAAAACTCTTACTGGAAAAACAATTACTCTCGAAGTAGA 3490 Query 155876 AGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCC 155935 || ||| || |||||| ||| || |||| ||||| |||||||| ||||| || || || Sbjct 3491 AGGTTCCGACAATATTGAAAATGTAAAAACCAAAATTCAAGATAAGGAAGGTATCCCACC 3550 Query 155936 AGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGA 155995 ||| |||||| | | |||| || ||||| || | |||||| | ||| | || || Sbjct 3551 AGACCAACAACGTCTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGA 3610 Query 155996 TTATAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || || || ||| || | || || |||||||| | ||||||||||| ||| Sbjct 3611 TTACAACAT-TCAAAAGGAATCCACTCTCCATTTAGTACTCAGATTAAGAGGTGGT 3665 Score = 132 bits (146), Expect = 7e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| | ||||| ||||||||||| | ||||| |||| | | Sbjct 3894 ATGCAAATCTTTGTTAAAACCCTTACTGGTAAAACTATTACTCTCGAAGTTGAAGGTAGT 3953 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || || ||| || || || | || || |||||||| ||||| || || ||||| ||| Sbjct 3954 GACAACATTGAGAATGTAAAGACAAAGATTCAAGATAAGGAAGGTATCCCACCAGATCAA 4013 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| |||||||| || | |||||| | || ||||| ||||| ||| Sbjct 4014 CAACGTCTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACATTATCCGATTACAAT 4073 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||| || || | ||||||||||| ||| Sbjct 4074 ATCCAAAAAGAATCCACTCTTCACTTGGTACTTAGATTAAGAGGTGGT 4121 Score = 122 bits (134), Expect = 1e-22 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | ||||| | ||||| ||||| ||||| |||||||| |||| | | Sbjct 4350 ATGCAAATTTTCGTCAAAACCCTCACTGGTAAAACCATTACCTTAGAAGTTGAAGGTAGT 4409 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || || ||| || || || | ||||| ||||| || ||||| || || ||||| ||| Sbjct 4410 GACAACATTGAGAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCAA 4469 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| |||||||| || | |||||| | ||| | || ||||| || Sbjct 4470 CAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGATTACAAC 4529 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| || | || || |||||||| | ||||||||||| ||| Sbjct 4530 AT--CCAAAAGGAATCCACTCTCCATTTAGTACTCAGATTAAGAGGTGGT 4577 Score = 114 bits (126), Expect = 2e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| | ||||| || || ||||| | ||||| |||| | | Sbjct 4578 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAGACCATTACTCTCGAAGTTGAAGGTAGT 4637 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || || ||| || || || | || || ||||| || ||||| || || ||||| ||| Sbjct 4638 GACAACATTGAGAATGTAAAGACAAAGATTCAAGACAAGGAAGGTATCCCACCAGATCAA 4697 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| ||| ||||| || | |||||| | ||| | || ||||| ||| Sbjct 4698 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 4757 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || ||||| || | || || |||||||| | ||||||||||| || Sbjct 4758 AT--CCAAAAGGAATCAACTCTCCATTTAGTACTCAGATTAAGAGGTGG 4804 Score = 113 bits (124), Expect = 7e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||||||| | ||||| ||||| ||||| |||||||| |||| | Sbjct 3666 ATGCAAATCTTTGTTAAAACACTCACTGGTAAAACCATTACCTTAGAAGTTGAAGGTAGC 3725 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || || || || || || | || || ||||| || ||||| || || ||||| ||| Sbjct 3726 GACAACATCGAGAATGTAAAGACAAAGATTCAAGACAAGGAAGGTATCCCACCAGACCAA 3785 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | ||||| | ||| | || ||||| || Sbjct 3786 CAACGTCTCATTTTCGCTGGTAAACAATTAGAAGACGGTCGTACTCTTTCTGATTACAAC 3845 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| || | || || |||||||| | ||||||||||| ||| Sbjct 3846 AT--CCAAAAGGAATCCACTCTCCATTTAGTACTCAGATTAAGAGGTGGT 3893 >seq140 Length=35707 Score = 154 bits (170), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || ||||||| | ||||| ||||| || |||||||||||||||| ||| Sbjct 26004 ATGCAAATCTTCGTTAAAACTCTCACTGGTAAAACAATCACATTAGAAGTCGAAGGTTCC 25945 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||| || ||| ||||| ||||| |||||||| || || ||||| ||| Sbjct 25944 GATAACATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 25885 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||||||||| || | |||||| | ||| | || |||||||| Sbjct 25884 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAAC 25825 Query 156003 ATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || |||| | | || || |||||||| | ||||||||||| ||| Sbjct 25824 AT-TCAAAAGGAATCTACTCTCCATTTAGTTCTTAGATTAAGAGGTGGT 25777 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| || || ||||| || || | |||| Sbjct 25548 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTAGAGGTTGAGGGTTCT 25489 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||||||| ||| || ||| || || |||||||||||||| || || ||||| ||| Sbjct 25488 GATAATATCGAAAATGTAAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 25429 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||||| |||| || ||||| || | |||||| | ||| | || ||||| || Sbjct 25428 CAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 25369 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || ||||| | ||||||||||| ||| Sbjct 25368 ATCCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGGT 25321 Score = 145 bits (160), Expect = 1e-29 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| |||||| | ||||| |||| | | Sbjct 25320 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACAATTACACTTGAAGTTGAAGGTAGT 25261 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || || ||| ||| || ||| ||||| ||||| |||||||| || || ||||| ||| Sbjct 25260 GACAACATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 25201 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | || | ||||||||| || | |||||| | ||| | || |||||||| Sbjct 25200 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAAC 25141 Query 156003 ATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || |||| | | || || |||||||| | ||||||||||| ||| Sbjct 25140 AT-TCAAAAGGAATCCACTCTCCATTTAGTTCTTAGATTAAGAGGTGGT 25093 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 atgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| ||||||| || ||||| ||||| || ||||| ||||| |||| |||| Sbjct 25776 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACAATCACATTGGAAGTTGAAGGTTCT 25717 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 ||||| ||| ||| || ||| ||||| ||||| |||||||| || || ||||| ||| Sbjct 25716 GATAACATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 25657 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || ||||| || | |||||| | ||| | || ||||| || Sbjct 25656 CAACGTCTCATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGATTACAAC 25597 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || ||||| | ||||||||||| ||| Sbjct 25596 ATCCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGGT 25549 Score = 143 bits (158), Expect = 4e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 155822 aatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| ||||||| | ||||| ||||| || || | ||||| |||| Sbjct 26233 AATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACCATCACTCTCGAAGTTGAAGGCAG 26174 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| ||||| ||||| ||| |||||| ||||| |||||||| || || ||||| || Sbjct 26173 TGACAATATCGAGAACGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTCCACCAGACCA 26114 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||||||||| |||| || ||||| || | |||||| | ||| | || ||||| || Sbjct 26113 ACAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 26054 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||||||||| | ||||||||||| ||| Sbjct 26053 CATCCAAAAAGAATCCACTCTTCATTTAGTTCTTAGATTAAGAGGTGGT 26005 >seq89 Length=43963 Score = 145 bits (160), Expect = 1e-29 Identities = 173/233 (74%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 155820 aaaatgcaaatatttattaaaaCATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || ||||||| || ||||| ||||| || || | ||||| |||| | Sbjct 14107 AAGATGCAAATCTTCGTTAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTTGAAGGT 14166 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || || || |||||| ||| || || ||||| |||||||| || || ||||| Sbjct 14167 TCAGACAACATCGAAAACGTCAAAGCCAAGATTCAAGACAAAGAAGGTATCCCACCAGAT 14226 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||| | | || | ||||||||| || | |||||| | |||||||| |||||| Sbjct 14227 CAACAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTTTATCCGATTAT 14286 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||||| || | || || || ||||| |||||||||||||| ||| Sbjct 14287 AACAT--CCAAAAGGAATCAACCCTCCACTTAGTTTTAAGATTAAGAGGTGGT 14337 >seq316 Length=22015 Score = 129 bits (142), Expect = 9e-25 Identities = 205/292 (70%), Gaps = 11/292 (4%) Strand=Plus/Minus Query 18157 ACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAA 18216 ||| ||||||||| |||||||||||||| | || || ||||| || ||| ||||| Sbjct 20785 ACAAGCAAAATCACAATGTAAACCTTCATCACGTGAAATCAATTCATTTGAAAATGTTAA 20726 Query 18217 CCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276 || ||||||| |||||| ||||| | |||||| || || ||||||| | || || Sbjct 20725 ACCTGGCATTAAACCTCTCTTTTTCAACCAAAAAATTGAACAAAAACTACCACTGAAAAA 20666 Query 18277 TATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTT-ATTGCTCA 18335 |||||||||||| || || || | || | ||| ||||| || |||| | | | | Sbjct 20665 TATACCCTCAACTGCTGCAAATGCAACCAAACGTTCTGCAAA--TGAATTTGAATCATTA 20608 Query 18336 GTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCAT 18395 |||||| || |||||||||| | | | ||| || || | || || |||| Sbjct 20607 --ATCCATCTTAATGCCCATTCTGCCTTCTTTTTAACACATGGAATTGTTTCAATTGCAT 20550 Query 18396 TAAACAAATCATCTT---TTTCTTTGGAATCTTTTATATAAGTGTCGATTAA 18444 |||| || | ||||| ||| ||| |||||| |||||||| || ||||| Sbjct 20549 TAAATAATTTATCTTTAGTTTGTTT---ATCTTTAATATAAGTTTCAATTAA 20501 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 18456 TTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGAT 18515 ||||||||||||| |||| || || || ||||||| ||| || |||| || || ||| Sbjct 20390 TTTCAGAATGTATATTTTCAATTGCAATTTGAAAACCATAGAAACATCTTGCTTCTGGAA 20331 Query 18516 ATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGAT 18574 ||| | || | ||||| ||| | | | ||| |||||||| ||||| |||| | Sbjct 20330 TTTGTACTTCAGACATAAA-TCTAGTTGCAAGATTTTCATTAACAATACCATCAGATGCA 20272 Query 18575 GCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATC 18618 || |||||||||||||||| | ||||| || ||||||||| Sbjct 20271 GCAAAAAATGCCAAAACATGTGAGATGAAGTGACGTTCATTATC 20228 >seq183 Length=30623 Score = 123 bits (136), Expect = 4e-23 Identities = 164/224 (73%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 155830 tatt-tattaaaaCATTGACT-GGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAA 155887 |||| |||| ||| ||| | | || || || || || | || || |||| ||||||||| Sbjct 20327 TATTATATTTAAA-ATTCAATAGGTAAGACCATCACCCTCGAGGTTGAAGGTTCTGATAA 20385 Query 155888 TATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAG 155947 || ||| || ||| ||||| |||||||||||||| || || ||||| |||||||| Sbjct 20386 CATCGAAAATGTTAAAGCCAAAATCCAAGATAAAGAAGGTATCCCACCAGATCAACAAAG 20445 Query 155948 ATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATC 156007 ||| || | ||||||||| || | ||||| | || | || ||||| ||||| Sbjct 20446 ATTAATCTTTGCCGGTAAACAATTAGAAGACGGTCGTACCCTCTCTGATTACAATATCCA 20505 Query 156008 CAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 ||||| | || || || ||||| |||||||||||||| |||| Sbjct 20506 AAAAGAATCAACTCTCCACTTAGTCTTAAGATTAAGAGGTGGTG 20549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731843539327600