Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq268 82.4 6e-11 >seq268 Length=24546 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 ||||||||||||||||| ||||||||||| || |||||||| || | ||| || | | Sbjct 17608 AAAATGCAAATTTTTGTTAAAACTTTAACTGGAAAAACCATAACTCTTGAAGTTGAAGGT 17549 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||| | | | | |||||| ||| ||| |||| ||||| | || ||| Sbjct 17548 TCAGATAATATTGAAAATGTAAAAGCAAAAATTCAAAATAAGGAAGGAATTCCTCCAGAT 17489 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| |||||||| |||| || | || | | || ||| Sbjct 17488 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCAGATTAC 17429 Query 107733 AACATTCAAAAGGAGTCTAC 107752 || ||||||||||| || || Sbjct 17428 AATATTCAAAAGGAATCAAC 17409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398861676461479