Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2826 84.2 2e-11 >seq2826 Length=2534 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/184 (71%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 55745 ACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGTGGTGCGTAC 55804 || || ||||| |||| || | | ||| ||||| ||| |||||||||||||| | | Sbjct 478 ACCGTTTGGGAAATTCGTCAAAGAACTCTCATTGATATGGCCGCTGATCGTGGTGCTTTC 419 Query 55805 ATCGACCA--GTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGA 55862 || || || ||| ||| || ||| | ||||| | | || | | ||||| | | Sbjct 418 ATTGATCAAAGTCAAAGTTTC--AACGTTTTCATCGCTGAACCAACCTTTGCCAAACTCA 361 Query 55863 GCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCGGA 55922 ||| ||||||||||| |||||||| || | ||||| |||||||||||||| || | Sbjct 360 CCTCAATGCACTTTTATTCTTGGAAGAAAGGTTTAAAGACTGGTATGTACTATCTTCGTA 301 Query 55923 CCCG 55926 | || Sbjct 300 CTCG 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547194720137800