Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_028820.1 Length=162101 Score E Sequences producing significant alignments: (Bits) Value seq429 96.9 4e-15 >seq429 Length=17259 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 61777 GTGCCAGTTTTAAATACATTAATTACTCGTTTAGCACGATTTGGCGTCTGTTTAAACCAT 61836 || || ||||| || ||| ||||||||| || ||||||||||| || |||||| |||| Sbjct 4919 GTTCCTGTTTTGAAAACACTAATTACTCTGTTTGCACGATTTGGAGTTTGTTTATACCAA 4978 Query 61837 TTAGA--TTGGGCAAGGTTCAAAGCAGCTTGGTCCCACTGTTTTGCTTTAAGTAGTTTAA 61894 |||| || | |||| || || | | ||||| |||| ||| || || ||| | Sbjct 4979 GTAGAATTTTTTAATTCTTCA--GCGGCCTCATTCCACTTTTTTTCTTCAATTAATTTGA 5036 Query 61895 TAGAGTTATTAAATCCAGCAACGCCAGCAACACCCATTTGGAATACCATATTCACTAAAG 61954 || || ||||| | ||| |||| |||||||||| ||||||||||| |||| | Sbjct 5037 GTGACTTTTTAAAATTTGAAACACCAGTTGCACCCATTTGAAATACCATATTGGCTAATG 5096 Query 61955 CCATTTGTC 61963 |||||| || Sbjct 5097 CCATTTTTC 5105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518575033129160