Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq89 154 1e-32 seq268 150 1e-31 seq140 147 1e-30 seq1461 138 8e-28 seq52 131 1e-25 seq356 129 4e-25 seq64 125 5e-24 seq183 95.1 8e-15 >seq89 Length=43963 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| || |||||||||||| | || || ||||| ||||||||||||||||| Sbjct 14107 AAGATGCAAATCTTCGTTAAAACCTTAACTGGTAAAACCATCACTCTCGAAGTTGAAGGT 14166 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||| | |||| | ||| || ||| |||||||||||| | || |||||| Sbjct 14167 TCAGACAACATCGAAAACGTCAAAGCCAAGATTCAAGACAAAGAAGGTATCCCACCAGAT 14226 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||| | || |||||||| |||||| | ||||| | || |||||| |||||| Sbjct 14227 CAACAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTTTATCCGATTAT 14286 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| ||||| || || || | || ||||||||||| || |||| || Sbjct 14287 AACATCCAAAAGGAATCAACCCTCCACTTAGTTTTAAGATTAAGAGGTGG 14336 >seq268 Length=24546 Score = 150 bits (166), Expect = 1e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 |||||||| ||||| |||||||| | || |||||||| || ||||| |||||||| Sbjct 17608 AAAATGCAAATTTTTGTTAAAACTTTAACTGGAAAAACCATAACTCTTGAAGTTGAAGGT 17549 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || | | |||||| ||||| ||||||| | || ||||| | || |||||| Sbjct 17548 TCAGATAATATTGAAAATGTAAAAGCAAAAATTCAAAATAAGGAAGGAATTCCTCCAGAT 17489 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| | ||||| ||||| || |||||| ||||||| | || |||||| |||||| Sbjct 17488 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTCGTACTTTATCAGATTAC 17429 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || || ||||| || || ||| | |||||||||||||| Sbjct 17428 AATATTCAAAAGGAATCAACACTTCATTTAGTTTTAAG 17391 >seq140 Length=35707 Score = 147 bits (162), Expect = 1e-30 Identities = 176/238 (74%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 23601 ATTACTTAA-AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAG 23659 |||| || | |||||| ||||| |||||||| || || || ||||| ||||||||||||| Sbjct 26243 ATTAATTGATAATGCAAATTTTTGTTAAAACTCTTACTGGTAAAACCATCACTCTCGAAG 26184 Query 23660 TTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTAC 23719 |||| || |||| | | || | ||||| ||||| |||||||||||| | | Sbjct 26183 TTGAAGGCAGTGACAATATCGAGAACGTAAAAGCTAAAATCCAAGACAAAGAAGGTATTC 26124 Query 23720 CGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAG 23779 | ||||| ||||| | ||||| || || || |||||| | ||||| | || ||| | Sbjct 26123 CACCAGACCAACAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTT 26064 Query 23780 GCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||||||||| |||||||| ||||| | ||||||||| | || || |||| || Sbjct 26063 CTGATTACAACATCCAAAAAGAATCCACTCTTCATTTAGTTCTTAGATTAAGAGGTGG 26006 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| || || || |||||||| | Sbjct 25320 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACAATTACACTTGAAGTTGAAGGTAGT 25261 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||| |||||| | ||| ||||| |||||||||||| | || ||||| ||| Sbjct 25260 GACAACATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 25201 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || |||||||| |||||| | ||||| | || ||| | ||||| ||| Sbjct 25200 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAAC 25141 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || ||||| | ||||||||| | || || |||| || Sbjct 25140 ATTCAAAAGGAATCCACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 25094 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||||||||| ||||| || ||||| ||||| | ||||| || | Sbjct 26004 ATGCAAATCTTCGTTAAAACTCTCACTGGTAAAACAATCACATTAGAAGTCGAAGGTTCC 25945 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| | ||| ||||| |||||||||||| | || ||||| ||| Sbjct 25944 GATAACATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 25885 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || |||||||| |||||| | ||||| | || ||| | ||||| ||| Sbjct 25884 CAACGTCTTATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAAC 25825 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || || | ||||||||| | || || |||| || Sbjct 25824 ATTCAAAAGGAATCTACTCTCCATTTAGTTCTTAGATTAAGAGGTGG 25778 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||||||| | || || ||||| ||||| | || ||||| | Sbjct 25548 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTAGAGGTTGAGGGTTCT 25489 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | | |||| ||||| || || || ||||||||| | || ||||||||| Sbjct 25488 GATAATATCGAAAATGTAAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 25429 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | ||||| || || || |||||| | ||||| | || ||| | ||||||||| Sbjct 25428 CAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 25369 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | || |||||| | || || |||| || Sbjct 25368 ATCCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGG 25322 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| ||||| | |||||||| | Sbjct 25776 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACAATCACATTGGAAGTTGAAGGTTCT 25717 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| | ||| ||||| |||||||||||| | || ||||| ||| Sbjct 25716 GATAACATTGAAAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCAGACCAA 25657 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || |||||| ||||||| | || ||| | ||||||||| Sbjct 25656 CAACGTCTCATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGATTACAAC 25597 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | || |||||| | || || |||| || Sbjct 25596 ATCCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGG 25550 >seq1461 Length=5937 Score = 138 bits (152), Expect = 8e-28 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 23607 TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTC 23666 || |||||| ||||| |||||||| || || |||||||| || ||||||||||| || Sbjct 3434 TATAATGCAAATTTTTGTTAAAACTCTTACTGGAAAAACAATTACTCTCGAAGTAGAAGG 3493 Query 23667 CACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | |||| | |||||| ||||| |||||| || || |||||| | || ||||| Sbjct 3494 TTCCGACAATATTGAAAATGTAAAAACCAAAATTCAAGATAAGGAAGGTATCCCACCAGA 3553 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||||| ||| | || || || || |||||| ||||||| | || ||| | ||||| Sbjct 3554 CCAACAACGTCTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGATTA 3613 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||||| ||||| || ||||| | |||||||| | || || |||| || Sbjct 3614 CAACATTCAAAAGGAATCCACTCTCCATTTAGTACTCAGATTAAGAGGTGG 3664 Score = 138 bits (152), Expect = 8e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||||||||| || ||||| || || | |||||||| | Sbjct 4350 ATGCAAATTTTCGTCAAAACCCTCACTGGTAAAACCATTACCTTAGAAGTTGAAGGTAGT 4409 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| |||| ||| |||| || |||| || ||||| |||||| | || |||||||| Sbjct 4410 GACAACATTGAGAATGTTAAGACCAAAA-TTCAAGACAAGGAAGGTATCCCACCAGATCA 4468 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || ||||| |||||| ||||||| | || ||| | |||||||| Sbjct 4469 ACAACGTCTCATTTTCGCCGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGATTACAA 4528 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || ||||| | |||||||| | || || |||| || Sbjct 4529 CATCCAAAAGGAATCCACTCTCCATTTAGTACTCAGATTAAGAGGTGG 4576 Score = 134 bits (148), Expect = 9e-27 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || || || |||||||| |||||||| | | Sbjct 4122 ATGCAAATCTTTGTTAAAACATTAACTGGTAAGACCATCACTCTTGAAGTTGAGGGCTCA 4181 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || | | |||||| | |||||||||||| || |||||||||||| | || ||||| || Sbjct 4182 GATAATATTGAAAATGTTAAAACAAAAA-TTCAAGACAAAGAAGGTATCCCACCAGACCA 4240 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || || || || |||||| ||||||| | || ||| | |||||||| Sbjct 4241 ACAAAGATTGATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGATTACAA 4300 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || ||||| | |||||||| | || || |||| || Sbjct 4301 CATTCAAAAGGAATCCACCCTCCATTTAGTCCTTAGATTAAGAGGTGG 4348 Score = 129 bits (142), Expect = 4e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||||||||| || || ||||| || |||||||||||||| | Sbjct 3894 ATGCAAATCTTTGTTAAAACCCTTACTGGTAAAACTATTACTCTCGAAGTTGAAGGTAGT 3953 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| |||| ||| | || || ||| ||| || || |||||| | || |||||||| Sbjct 3954 GACAACATTGAGAATGTAAAGAC-AAAGATTCAAGATAAGGAAGGTATCCCACCAGATCA 4012 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || ||||| |||||| | ||||| | || || ||| ||||||||| Sbjct 4013 ACAACGTCTCATTTTCGCCGGTAAACAATTAGAAGATGGTCGTACATTATCCGATTACAA 4072 Query 23790 CATACAAAAAGAGTCCAC 23807 || |||||||| ||||| Sbjct 4073 TATCCAAAAAGAATCCAC 4090 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| || || || || || || |||||||||||||| | Sbjct 4578 ATGCAAATCTTTGTTAAAACTCTTACTGGTAAGACCATTACTCTCGAAGTTGAAGGTAGT 4637 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| |||| ||| | || || ||| ||| ||||| |||||| | || |||||||| Sbjct 4638 GACAACATTGAGAATGTAAAGAC-AAAGATTCAAGACAAGGAAGGTATCCCACCAGATCA 4696 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || |||||| | ||||| | || ||| | |||||||| Sbjct 4697 ACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 4756 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||| || || || | |||||||| | || || |||| ||| Sbjct 4757 TATCCAAAAGGAATCAACTCTCCATTTAGTACTCAGATTAAGAGGTGGA 4805 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| ||||| || ||||| || || | |||||||| | Sbjct 3666 ATGCAAATCTTTGTTAAAACACTCACTGGTAAAACCATTACCTTAGAAGTTGAAGGTAGC 3725 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||| | || ||| | || ||||| | || ||||| |||||| | || ||||| || Sbjct 3726 GACAACATCGAGAATGTAAAGACAAAGA-TTCAAGACAAGGAAGGTATCCCACCAGACCA 3784 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || || |||||| | ||||||| || ||| | |||||||| Sbjct 3785 ACAACGTCTCATTTTCGCTGGTAAACAATTAGAAGACGGTCGTACTCTTTCTGATTACAA 3844 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || ||||| | |||||||| | || || |||| || Sbjct 3845 CATCCAAAAGGAATCCACTCTCCATTTAGTACTCAGATTAAGAGGTGG 3892 >seq52 Length=54870 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||||||| | || || ||||| || || | |||||||| | Sbjct 45692 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACCATTACCTTAGAAGTTGAAGGTAGC 45751 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| ||||| |||||| || ||||||||| | || ||||| ||| Sbjct 45752 GATAACATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAA 45811 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | ||||| || || || || ||| | ||||| | || ||| | ||||||||| Sbjct 45812 CAAAGATTAATTTTCGCTGGTAAGCAATTAGAAGATGGTCGTACTCTCTCTGATTACAAC 45871 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||||||||| | |||||||||||||| || |||| || Sbjct 45872 ATCCAAAAAGAGTCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGG 45918 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||||||| | || || ||||| ||||| | || ||||| | Sbjct 45464 ATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTAGAGGTTGAAGGTTCC 45523 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | | |||| ||||| || || || ||||||||| | || ||||| ||| Sbjct 45524 GATAATATCGAAAATGTAAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGACCAA 45583 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || |||||| | ||||| | || ||| | ||||||||| Sbjct 45584 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGATTACAAT 45643 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | |||||||||||||| || |||| || Sbjct 45644 ATCCAAAAAGAATCCACTCTCCATTTAGTTTTAAGATTAAGAGGTGG 45690 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||||||| | || || ||||| || || | |||||||| | Sbjct 45920 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATTACATTGGAAGTTGAAGGTAGT 45979 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||| | | ||| || ||| || ||||||||| | || ||||||||| Sbjct 45980 GATAACATTGAGAACGTCAAAGCCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 46039 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || |||||| | ||||| | || ||| | ||| || ||| Sbjct 46040 CAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGACTATAAC 46099 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | || |||||| | || || |||| || Sbjct 46100 ATCCAAAAAGAATCCACTCTCCACTTAGTTCTTAGATTAAGAGGTGG 46146 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || |||||||| | || || ||||| || || | || ||||| || Sbjct 46148 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAAACAATTACCTTGGAGGTTGAAGGCAGT 46207 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||| | | ||| || || || ||||||||| | || ||||||||| Sbjct 46208 GATAACATTGAGAACGTCAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 46267 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || |||||| ||||||| | || ||| | || || ||| Sbjct 46268 CAACGTCTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCTGACTATAAC 46327 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || ||||| | ||||| |||||||| || |||| || Sbjct 46328 ATCCAAAAGGAATCCACTCTCCATTTGGTTTTAAGATTAAGAGGTGG 46374 >seq356 Length=19801 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| || || || ||||| || || | |||||||| | Sbjct 11585 ATGCAAATTTTTGTTAAAACTCTTACAGGTAAAACAATTACATTGGAAGTTGAAGGTAGC 11526 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || | |||||| | ||||| |||| | || || ||||||||| | || |||||||| Sbjct 11525 GATAACATTGAAAATGTTAAAGCAAAGA-TTCAAGATAAAGAAGGTATTCCACCAGATCA 11467 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | ||||| || || || |||||| | ||||| | || ||| | |||||||| Sbjct 11466 ACAAAGATTAATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGATTACAA 11407 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| ||||| | |||||||||||||| || |||| || Sbjct 11406 TATCCAAAAAGAATCCACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 11359 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||||||| | || || ||||| ||||| | || ||||| | Sbjct 11357 ATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTAGAGGTTGAAGGTTCT 11298 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | | | |||| ||||| || || || ||||||||| | || ||||||||| Sbjct 11297 GATAATATCGAAAATGTAAAAGCCAAGATCCAAGATAAAGAAGGTATCCCACCAGATCAA 11238 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || |||||| ||||||| | || ||| | || || ||| Sbjct 11237 CAACGTCTTATTTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTCTCTGACTATAAC 11178 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 || ||||| || || || | ||||||||| |||| Sbjct 11177 ATCCAAAAGGAATCAACTCTTCATTTAGTTCTAAG 11143 >seq64 Length=50952 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| | || || ||||| || ||| | |||||||| | Sbjct 24510 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACAATTACTTTGGAAGTTGAAGGTAGT 24451 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || | |||||| ||||| |||||| || ||||||||| | || ||||||||| Sbjct 24450 GATAACATTGAAAATGTAAAAGCCAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 24391 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || |||||| | ||||| | || ||| | || || ||| Sbjct 24390 CAACGTCTCATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCTGACTATAAC 24331 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || |||||||| || || | |||||||||||||| || |||| || Sbjct 24330 ATTCAAAAAGAATCAACTCTTCATTTAGTTTTAAGATTAAGAGGTGG 24284 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| ||||||||| | || || ||||| || || | |||||||| || Sbjct 24282 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATTACATTGGAAGTTGAAGGCAGT 24223 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || | |||| ||| | ||| | || | | || ||||||||| | || |||||||| Sbjct 24222 GATAACATTGAGAATGTCAAAGCCAAGA-TCCAAGATAAAGAAGGTATCCCACCAGATCA 24164 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || || |||||| | ||||| | || ||| | ||| || || Sbjct 24163 ACAACGTCTTATTTTCGCTGGTAAACAATTAGAAGATGGTCGTACTCTCTCCGACTATAA 24104 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| ||||| || ||||| | ||||| |||||||| || |||| || Sbjct 24103 CATCCAAAAGGAATCCACTCTCCATTTGGTTTTAAGATTAAGAGGTGG 24056 >seq183 Length=30623 Score = 95.1 bits (104), Expect = 8e-15 Identities = 116/157 (74%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 23681 AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 |||| ||||| | |||| | || ||||||||| | || ||||||||||| | |||| Sbjct 20392 AAATGTTAAAGCCAAAA-TCCAAGATAAAGAAGGTATCCCACCAGATCAACAAAGATTAA 20450 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | |||||||| |||||| | ||||||| || || | |||||||| || ||||||| Sbjct 20451 TCTTTGCCGGTAAACAATTAGAAGACGGTCGTACCCTCTCTGATTACAATATCCAAAAAG 20510 Query 23801 AGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || || | || ||||| ||||| || |||| || Sbjct 20511 AATCAACTCTCCACTTAGTCTTAAGATTAAGAGGTGG 20547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337996784260388