Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20intermedium_20[genbank_20GCA_5F000277465.1_202012- 07-10] 3,111 sequences; 30,529,520 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1461 84.2 2e-11 >seq1461 Length=5937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | |||| |||||| ||| || |||||||| ||||| Sbjct 4127 TTGCATACCACCTCTTAATCTAAGTACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTA 4068 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||||| | | || | || || | || || ||||| || || | ||| || ||||| Sbjct 4067 ATCGGATAATGTACGACCATCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATC 4008 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || || | ||||||||| || ||||| ||| | | | ||| |||| Sbjct 4007 TGGTGGGATACCTTCCTTATCTTGAATCTTTGTCTTTACATTCTCAATGTTGTCACTACC 3948 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| || || || || ||||| || || ||||||||||| Sbjct 3947 TTCAACTTCGAGAGTAATAGTTTTACCAGTAAGGGTTTTAACAAAGATTTGCAT 3894 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| | ||| | || | || || ||| ||||||||||||||||| Sbjct 4583 TTGCATACCACCTCTTAATCTGAGTACTAAATGGAGAGTGGATTCCTTTTGGATGTTGTA 4524 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | || || | || |||| || || ||||| || || | ||| || ||||| Sbjct 4523 ATCAGAAAGAGTACGACCATCTTCCAATTGTTTACCGGCGAAAATGAGACGTTGTTGATC 4464 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || || | ||||||||| || || || ||| || ||| | ||| |||| Sbjct 4463 TGGTGGGATACCTTCCTTGTCTTGAATTTTGGTCTT-AACATTCTCAATGTTGTCACTAC 4405 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | ||||| || || || |||||||| || ||||| |||||||| Sbjct 4404 CTTCAACTTCTAAGGTAATGGTTTTACCAGTGAGGGTTTTGACGAAAATTTGCAT 4350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359976750851487