Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq36 104 2e-17 >seq36 Length=2033623 Score = 104 bits (114), Expect = 2e-17 Identities = 209/304 (69%), Gaps = 7/304 (2%) Strand=Plus/Minus Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||||| |||| || || || || || ||||| || || || || || || |||| |||| Sbjct 729770 CTGTAAGTTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCT 729711 Query 17315 TCCGCTATTTGAACTTC-CACGTAGA-ATCGTTCCGCTAGATTTTCGTTCACGATGCCGT 17372 || | |||||||||||| | | || | | ||| ||||||||||| || || || || | Sbjct 729710 TCTGGTATTTGAACTTCACTCATAAATTTAGTT--GCTAGATTTTCATTAACAATACCAT 729653 Query 17373 CGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTC-GTCCGGTGTAA-- 17429 | || || ||||| || |||| || |||||||| |||||| | | ||| Sbjct 729652 CTGAAGCTGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACT 729593 Query 17430 GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAG 17489 | ||| || || | ||| ||| || ||| | ||||| | ||||| || | Sbjct 729592 TATTTTCCCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGG 729533 Query 17490 CCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATC 17549 | |||| | ||||||||||||||| || || ||||| || || |||| |||| ||| Sbjct 729532 CTTCTGCTTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATC 729473 Query 17550 TATC 17553 |||| Sbjct 729472 TATC 729469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545250656720