Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq36 190 2e-43 seq33 136 5e-27 >seq36 Length=2033623 Score = 190 bits (210), Expect = 2e-43 Identities = 219/294 (74%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 24430 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 24489 |||| |||||||| ||||||||||| ||||| || || ||||||||||| || || | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 24490 TCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549 | || ||||| | |||| ||||| ||||||||| || || || || |||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 24550 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT---CC 24606 ||||||| || ||||||| || |||| |||||| | | ||| ||||| || Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 24607 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666 | ||||||||||| | | || ||| | ||||| ||||||| ||||| || ||||| | Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 24667 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 24720 ||||||||||||||| ||||| | |||| ||||||||| | ||||||||||| Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 134 bits (148), Expect = 2e-26 Identities = 396/595 (67%), Gaps = 29/595 (5%) Strand=Plus/Minus Query 23844 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTACCTTCTAATGATATA 23900 ||||| |||||| | || ||| ||| ||||| || | ||| | || || || || Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352 Query 23901 TTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAA 23960 ||||||| ||||| | ||||||||| |||| | || |||| | || || ||| Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293 Query 23961 ATCAAT-CTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTAT 24019 | | | | ||||||| |||||| || ||| | ||| | | ||||| || || Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233 Query 24020 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 24079 || | |||||| |||| |||| | |||||| | |||| | || || ||| | || Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCAACAGCATCTTTGAT 730173 Query 24080 AATAGATCT-TACTG-TTTCTTCACTCGGTGGATACAATAAATGTTTAA---ACATCAAA 24134 ||| ||| || || ||| |||| | || | | ||||| | | |||| Sbjct 730172 AATG--TCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAA 730118 Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || || || | || |||||||| || || | |||||| ||||| ||||| || || | Sbjct 730117 CAAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAA 730058 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA-CGCAAATGATCCAGAAAAGAA 24253 || ||||||| || | || || |||||||| ||||| | ||| | ||| || || Sbjct 730057 CCTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTA-CCACTGAAAAA 729999 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTAT 24313 || ||||| || || ||||| || | | ||| ||| || | | || || || Sbjct 729998 GATACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGAT 729942 Query 24314 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT-AA 24372 ||| | ||||| || ||||||||||| ||||| || || || ||||||||||| || Sbjct 729941 CCATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAA 729882 Query 24373 AGAGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACTA 24425 | ||| ||||| | || | ||||| |||||||||||| ||||||||| Sbjct 729881 TAATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq33 Length=884058 Score = 136 bits (150), Expect = 5e-27 Identities = 1082/1732 (62%), Gaps = 77/1732 (4%) Strand=Plus/Minus Query 52948 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 53007 ||| || || || || || ||||| |||||||| | || | | ||||| ||| || Sbjct 112001 TTGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGTTTAATCTC 111942 Query 53008 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATAGA 53064 ||||| || || |||| | | || | ||| ||||||| | || |||| |||| ||| Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 53065 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATT--CCATAATTTTCTCTCGGTT 53122 |||| | | | |||||| | || || | || |||| ||| | | ||| | Sbjct 111881 ACCACGGTGTGCTATAATCTTGTTTTTCAAGTC--CATTGACCACAGTCCAAGCTCCATA 111824 Query 53123 AAAACTCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCCGAGT 53181 | | | ||| | ||| ||||| || ||| |||||| || | || ||||| | | Sbjct 111823 AGATCAGAAAGCAATTGCTTATTAA-TAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 53182 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 53241 || || ||||| || || ||||| | || |||||| || || ||||||||| || || Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 53242 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 53301 || || ||||| || || | || | ||||||||||||| | | ||| | || Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 53302 TTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 53361 || || ||| |||||||||| |||| | || || ||| || Sbjct 111644 CTTGAGTTGTTTCCAATTCCAACGATCGGTTGGAGTGACACCCCACATATCGTATTGGAG 111585 Query 53362 AATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAG 53421 ||||| | ||| || || ||| ||| || ||||| ||||| | ||| || Sbjct 111584 TATACCTTGACTTGCTGGAGAACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAG 111525 Query 53422 TTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 53479 ||| ||| || ||| || | | || || || ||| | |||| |||| | | Sbjct 111524 TTCT--ACTGAGGCGCTTAAAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCA-A 111468 Query 53480 TCTTG-TGCTTCCAGGCTATCAAATGGATAATTTAAGAG--AATAAACGCGTCTGCTAAT 53536 | | | ||| | | ||||| || || ||| | || ||| | || || | Sbjct 111467 TTTAGCTGCACCTGTGGATTCAAAAGG-TAGACGAAGGGCTAAGAAAA-CATCAGCAAGA 111410 Query 53537 CCTTGAACACCAATACCGATAGGTCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGA 53593 ||||||| ||||||||| || ||||| || | || ||| | | ||||||||| Sbjct 111409 CCTTGAATACCAATACCAATTGGTCTGTGACGGAGGTTGCTAG---TCTTAGCTTCTGGG 111353 Query 53594 ATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTA-CTTTG--ACC 53650 | ||||||||||| |||| ||||| || ||||| ||||| || | ||||| || Sbjct 111352 ACTGGATAATAATTTCTATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACT 111293 Query 53651 ACAT------CCT-----------TCAG----TTTGAGAAAATCAAATTGTCCATC--TA 53687 ||| ||| ||| ||| | ||| | ||| | || | Sbjct 111292 TCATATAAAGCCTGATGATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTG 111233 Query 53688 TTACAAACATGT-TCAA------------TGCAATAGATGCCAGATTACAAACGGCTACC 53734 ||| ||| | | |||| ||||||||| || || |||||||| || || Sbjct 111232 TTAGGAACCTCTCTCAAAAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACT 111173 Query 53735 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 53794 || | | | | ||||| || |||||||| || | ||| | ||||| || Sbjct 111172 TCCTCTGGAGATGTGTATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCC 111113 Query 53795 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCA 53854 || || | |||||| || | ||||| ||||| || || ||||| | || |||||| Sbjct 111112 AAGTTCTTTTGATTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCA 111053 Query 53855 GTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTG 53914 |||||||| || ||||| | ||| || ||| | | ||||||| | | ||| Sbjct 111052 GTTTCAATTTGAGATTCCACAATAGCAAACCACAAATCTTGAGCCTTAACAACT--TTTC 110995 Query 53915 TATCT----CTTTTCTCT-TTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAA 53969 || || || | | ||| ||| ||| | | | || || ||||| Sbjct 110994 TAGCTAATCCTGGAGTTTGTTCATATTTGAGATAAAGTTTTCTGAATTCCTCTCCATGG- 110936 Query 53970 CATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 54028 || | | | | || || |||| ||||| | | ||||| ||| | | | Sbjct 110935 CACTCTGCGAGACCTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGA 110876 Query 54029 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 54087 || |||| ||||||||||||| ||||||||| || ||| |||| || | | | | Sbjct 110875 ACACGTTCCATAAAGAGATCACAAATCCAAAGGGC-ATAGAATAAGTCACGAGCACGAAT 110817 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 || || || || ||| || || ||||| | |||| | | | ||||| ||||| || Sbjct 110816 CTCTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGG 110757 Query 54148 TTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 54207 || ||||||| | | | | || | || ||||| || |||| || | ||| Sbjct 110756 CTCTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGC 110697 Query 54208 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGA 54267 |||| ||| | || | |||||||| | | ||||||||| | || || || || Sbjct 110696 AGTGTCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACG 110637 Query 54268 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTT 54327 ||||||| | | |||||||| || || || | ||| || || || || ||| Sbjct 110636 GATATAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTT 110577 Query 54328 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 54387 | || ||||||||| |||| || ||||| ||||| || || || ||| || |||| Sbjct 110576 ACTAATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCAT 110517 Query 54388 GTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTCCCGCATTAAATAAGGTAG 54446 | || | ||||| ||||| || | || | || || ||||| || || |||| Sbjct 110516 TTGAACCAAGAAACAAGATGACATCTGAGGGAATGGT-GTACCAGCATTGAACAATGTAG 110458 Query 54447 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTA 54506 ||| ||| || |||||| | || || || | || ||||| | ||| | || | Sbjct 110457 GAGTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCA 110398 Query 54507 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566 || | ||| || || | | ||| | ||| ||||| || ||||||||||| || | Sbjct 110397 AGTCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAA 110338 Query 54567 TCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 54618 | | || || |||| || ||| |||||||||| ||||||||||| Sbjct 110337 TGATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721199237920