Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq27 107 2e-18 seq38 98.7 9e-16 seq31 93.3 4e-14 >seq27 Length=1864556 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || || | ||| || |||||||||||||||||||| Sbjct 1617506 TACCACCTCTTAATCTGAGTACTAAATGTAATGTTGATTCTTTTTGAATGTTGTAATCAG 1617447 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || || |||| | | || |||||||| | Sbjct 1617446 AGAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGATCGGGTG 1617387 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| |||||| ||| || | ||| | |||||| | | |||| Sbjct 1617386 GAATACCTTCTTTATCTTGAATTTTGGCTTTGACATTTTCAATGGTGTCGGAACCTTCGA 1617327 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | ||||| || || | |||||| |||||||| ||||| Sbjct 1617326 CTTCTAAGGTAATAGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1617278 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || |||| || || |||||||| ||||||||||| Sbjct 1617962 TACCACCTCTTAATCTGAGTACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG 1617903 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || ||| | ||||| | || || ||||| | Sbjct 1617902 AAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATGAGTCTTTGTTGGTCGGGTG 1617843 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| |||||| || || | ||| | |||||| | | || | Sbjct 1617842 GGATACCTTCTTTGTCTTGAATTTTAGCCTTTACGTTTTCAATGGTGTCGGAACCTTCTA 1617783 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | ||||| || |||| |||||| |||||||| ||||| Sbjct 1617782 CTTCTAAGGTAATGGTTTTACCAGTCAAAGTTTTAACAAAAATTTGCAT 1617734 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-G 118568 |||| || | |||||| | |||||||| | || || |||||||||||||| ||||| | Sbjct 1617734 TACCACCTCTTAATCTGAGAACCAAGTGAAGAGTGGATTCTTTTTGAATGTTATAATCAG 1617675 Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628 | || || | || || | ||||| |||||| | || || | || |||||||| Sbjct 1617674 ATAAT-GTTCTACCGTCTTCTAATTGTTTACCAGCGAAAATAAGTCTTTGTTGATCGGGT 1617616 Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || || || || |||||| |||||| ||| || | ||| | |||||| | | || Sbjct 1617615 GGAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTGTCTGAACCTTCA 1617556 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | ||||| || || | || ||||||||||| ||||| Sbjct 1617555 ACTTCAAGGGTAATTGTTTTACCAGTTAAGGTCTTTACAAAAATTTGCAT 1617506 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | |||||| | || || |||| || || |||||||||||||||||||| Sbjct 1618190 TACCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAG 1618131 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || ||| || | ||||| || || |||| | | || || ||||| | Sbjct 1618130 AGAGGGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAATCTTTGTTGGTCGGGTG 1618071 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| |||||| ||| || | ||| | ||| || | | || | Sbjct 1618070 GAATACCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAACCTTCAA 1618011 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | ||||| || |||| || ||||||||||| ||||| Sbjct 1618010 CTTCAAGGGTAATAGTTTTACCAGTCAAGGTCTTTACAAAAATTTGCAT 1617962 >seq38 Length=878590 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| || || |||||||| |||||||||||| | ||| || ||| || Sbjct 148392 ACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCTTCT 148333 Query 118590 AGCTGTTTTCC-AGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 | ||||| || |||| | ||||| | || |||||||| || || || || || ||| Sbjct 148332 AATTGTTTACCGAGCGAAAATGAGTCTTTGTTGATCGGGTGGGATACCTTCTTTATCTTG 148273 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | ||||| |||||| | | || || || | ||| | ||||| Sbjct 148272 GATTTTGGCTTTGACATTTTCGATGGTGTCGGAACCTTCAACTTCTAGGGTAATGGTTTT 148213 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTA 118744 || || | ||||| ||||| || ||||| | ||| Sbjct 148212 ACCAGTTAATGTTTTAACAAAGATTTGCATTGTTTA 148177 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCG 118568 ||||||| | |||||| || | |||| |||| ||||| |||||||||||||||||||| Sbjct 149096 TACCTCCTCTTAATCT-AAGAACAAGATGGAGAGTAGATTCTTTTTGAATGTTGTAATCA 149038 Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628 | ||| || ||| || | ||||| ||||| | ||||| | || || ||||| Sbjct 149037 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGTCTTTGTTGGTCGGGT 148978 Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 || || || || || ||| ||||| ||| || | ||||| ||| || | | || Sbjct 148977 GGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTCGATGGTATCAGAACCTTCA 148918 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | || || || |||| || || ||||| || ||||| Sbjct 148917 ACTTCCAAGGTAATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCAT 148868 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | | ||| | ||||| |||| || || |||||||| ||||||||||| Sbjct 148640 TACCTCCTCTGAGTCTGAGTACCAAATGGAGAGTTGATTCTTTTTGGATGTTGTAATCAG 148581 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | ||||| || || |||| | ||| || || ||||| | Sbjct 148580 AGAGAGTACGACCATCTTCTAATTGTTTACCGGCAAAGATTAAACGTTGTTGGTCGGGTG 148521 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||||| ||| || | ||||| ||| || | | || | Sbjct 148520 GGATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCGATGGTATCAGAACCTTCAA 148461 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || || || |||| || || |||||||| ||||| Sbjct 148460 CTTCAAGGGTAATGGTCTTACCAGTCAAGGTCTTAACAAAAATTTGCAT 148412 >seq31 Length=145395 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || || |||| ||| || |||||||||||||||||||| | ||| || |||||| Sbjct 7830 ACTAAATGGAGTGTTGATTCTTTTTGAATGTTGTAATCAGAGAGAGTACGACCATCCTCA 7889 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| ||||| |||| || | || || ||||| || || || || |||||| | Sbjct 7890 AGTTGTTTACCAGCAAAGATAAGTCTTTGTTGGTCGGGTGGGATACCTTCTTTGTCTTGA 7949 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | ||| | ||| || | | || || || | || | || || Sbjct 7950 ATTTTGGTCTTTACATTTTCAATGGTATCAGAACCTTCAACTTCCAAAGTAATTGTCTTA 8009 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||||| ||||| || ||||| Sbjct 8010 CCAGTCAATGTTTTGACAAAGATTTGCAT 8038 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || || || | ||| || |||||||||||||| || || | ||| || ||| || Sbjct 8515 ACTAAATGTAGTGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTACGACCATCTTCC 8574 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||||| ||||| | || || | || || ||||| || || ||||| || ||| Sbjct 8575 AATTGTTTACCAGCAAAAATAAGTCTTTGTTGGTCGGGTGGGATACCCTCTTTATCTTGG 8634 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| |||||| | ||| | ||| || | | || ||||| | ||| | || || Sbjct 8635 ATTTTGGTTTTAACATTTTCAATGGTATCAGAACCTTCTACCTCTAAGGTAATTGTCTTA 8694 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTATT 118746 || |||| ||| |||||||| || ||||| ||||| Sbjct 8695 CCAGTCAAAGTCTTTACAAATATTTGCATAATTTATT 8731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830114485368