Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq36 122 8e-23 >seq36 Length=2033623 Score = 122 bits (134), Expect = 8e-23 Identities = 380/581 (65%), Gaps = 18/581 (3%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||||||| ||| | |||||| ||||| | ||| | || || || || || Sbjct 730408 TTTTGATATTCAGCTACTTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATCATT 730349 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGT 14032 ||||| |||| || ||||| || || |||| | || | |||| || | | | Sbjct 730348 TCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACCAAGAGAGACAACT 730289 Query 14033 AATCTATC--CGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 | | ||| ||||| |||||||| ||||| ||||| | |||||||| || | Sbjct 730288 AGACGATCTGCGCAA--AACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAATGA 730231 Query 14091 GTTTTACAGGAATTATATTG-GTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 14149 | | || || | | ||| |||| |||||| ||||| | ||||| || || ||| Sbjct 730230 GATCAACTGGTAG-AGATTCAGTTACAAATTCCTTTTCACATGCAACAGCATCTTTGATA 730172 Query 14150 ATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAA---AAATTAAACAC 14206 || |||| |||| || | | ||||| || ||||| | | ||||| Sbjct 730171 ATGTCTATAATGATTT--TTTCATCTAATCTATTTACGA-GTTTACTGTAGAGCAAACAA 730115 Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266 ||||| | |||||| || || ||||| | |||||| | ||| || || ||||| || ||| Sbjct 730114 GCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAACCT 730055 Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326 ||||| || |||| ||| |||| |||||| || | | ||| || || || || Sbjct 730054 GGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAAAAGATA 729995 Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14386 || ||||| || ||||| || | |||| ||| |||| ||| ||| || || || Sbjct 729994 CCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAATGATCTAGAATTGATCCATCTC 729935 Query 14387 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14446 | |||||||| | || ||||| | | | || ||||| |||||||| ||| Sbjct 729934 AAG------GCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAAT 729881 Query 14447 AAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT 14487 || | | || | || | || ||| ||||||||||| Sbjct 729880 AATTTAGCTTTTTGTTCTGGGTTTTTAATATATGTATCAAT 729840 Score = 100 bits (110), Expect = 3e-16 Identities = 222/324 (69%), Gaps = 13/324 (4%) Strand=Plus/Minus Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 ||||||| || || ||||| || || || || |||||||| |||||||| ||||||| Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 14562 ATTGTACCTCTGAGTAAAATCTTTCG--GCCAAATTTTCATTAACTATACCATCACTAGC 14619 ||| || || | | | | ||| | || | |||||||||||| |||||||| ||| Sbjct 729703 TTTGAACTTC--ACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGC 729646 Query 14620 TGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATT--GCTGAGTTTT 14674 |||||||||||| |||| || ||| || || || | | |||||| || | ||| Sbjct 729645 TGCAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTA--TTT 729588 Query 14675 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACA 14734 | ||| || | ||| | | | ||| | || || ||||||| || || | Sbjct 729587 TCCCATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCT 729528 Query 14735 GCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTTGAA 14794 |||| ||||||||| |||||| ||| ||| || ||||| | ||||||| | Sbjct 729527 GCTTGTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATC-TATC 729469 Query 14795 GATGTT-TCTTTAAGAATTGGTTC 14817 |||| ||||| | ||||||||| Sbjct 729468 CTTGTTCTCTTTTAAAATTGGTTC 729445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345274416720