Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq36 181 1e-40 seq33 150 2e-31 >seq36 Length=2033623 Score = 181 bits (200), Expect = 1e-40 Identities = 217/294 (74%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936 |||| |||||||| ||||||||||| || || || || ||||||||||| || || | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996 | || ||||| | |||| ||||| ||||||||| || || ||||| |||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT---CC 34053 ||||||| || ||||||| || |||| |||||| | | ||| ||||| || Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 | ||||||||||| | | || ||| | ||||| ||||||| ||||| || ||||| | Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTAT 34167 ||||||||||||||| ||||| | |||| ||||| || | ||||||||||| Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 150 bits (166), Expect = 2e-31 Identities = 396/593 (67%), Gaps = 25/593 (4%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTTCCTTCCAATGATATA 33347 ||||| |||||| | || ||| ||| ||||| || | ||||| || ||| || || Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352 Query 33348 TTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAA 33407 ||||||| |||| || ||||||||| ||| |||| ||||| | || || ||| Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293 Query 33408 ATCAAT-CTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33466 | | | | ||||||| || || || ||| | ||| | | ||||| || || Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233 Query 33467 GAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA-ATGGATACCGCATTTGTTA 33525 ||| | |||||| |||| |||| | |||||| | |||| ||| | || |||| | | | Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCA-ACAGCATCTTTGA 730174 Query 33526 TAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAA---ACATCAAAC 33582 |||| | ||| | ||| |||| | || || | ||||| | | ||||| Sbjct 730173 TAATGTCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAAC 730117 Query 33583 ATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTC 33642 | || || | || || ||||| || || | |||||| ||||| || || || || | | Sbjct 730116 AAGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAAC 730057 Query 33643 CGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGA 33702 | ||||||| || | || || |||||||| |||||| ||| || || |||| Sbjct 730056 CTGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTACCACTGAAAAAGA 729997 Query 33703 TTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCC 33762 | ||||| || || ||||| || | | ||||||| || | | || || |||| Sbjct 729996 TACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGATCC 729940 Query 33763 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT-AAAG 33821 | | ||||| || ||||||||||| ||||| || || |||||||| ||||| || Sbjct 729939 ATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAATA 729880 Query 33822 AGATAGtttttttCATTACT--ATCTTTAACATAAGTATCGATCAAAAGACTA 33872 | ||| ||||| | || | ||||| ||| ||||| || ||||||||| Sbjct 729879 ATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq33 Length=884058 Score = 150 bits (166), Expect = 2e-31 Identities = 1086/1733 (63%), Gaps = 79/1733 (5%) Strand=Plus/Minus Query 62186 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTC 62245 ||| || || || || || ||||| |||||||| | || | | ||||| ||| || Sbjct 112001 TTGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGTTTAATCTC 111942 Query 62246 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGA 62302 ||||| || || |||| | | || | ||| ||||||| | || |||| |||| || Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATT--CCATAATTTTCTCTCGGTT 62360 |||| | | | |||||| | || || | || |||| ||| | | ||| | Sbjct 111881 ACCACGGTGTGCTATAATCTTGTTTTTCAAGTC--CATTGACCACAGTCCAAGCTCCATA 111824 Query 62361 AAAACTCTAAGGAGATGCGGGTTAACTACTTGGAA-TTCTCCAGACAATACTCTCCGAGT 62419 | | | ||| | ||| |||| || ||| || ||| || | || ||||| | | Sbjct 111823 AGATCAGAAAGCAATTGCTTATTAA-TAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 62420 GTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGA 62479 || || ||||| || || ||||| | | |||||| || || ||||||||| || || Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 62480 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 62539 || || ||||| || || | || | ||||||||||||| | | ||| | || Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 62540 TTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAG 62599 || || |||| |||||||||| |||| | || ||| ||||| || Sbjct 111644 CTTGAGTTGTTTCCAATTCCAACGATCGGTTGGAGTGACACCCCACATATCGTATTGGAG 111585 Query 62600 AATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAG 62659 ||||| | ||| || || ||| ||| ||| ||||| ||||| | ||| || Sbjct 111584 TATACCTTGACTTGCTGGAGAACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAG 111525 Query 62660 TTTACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGA 62717 || | ||| || ||| || | | || || || || | |||| |||| | | Sbjct 111524 TT--CTACTGAGGCGCTTAAAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCA-A 111468 Query 62718 TCTTG-TGCTTCCGGGCTATCAAATGGATAATTTAAGAG--AATAAACGCGTCCGCTAAT 62774 | | | ||| | | | ||||| || || ||| | || ||| | || || | Sbjct 111467 TTTAGCTGCACCTGTGGATTCAAAAGG-TAGACGAAGGGCTAAGAAAA-CATCAGCAAGA 111410 Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGA 62831 ||||||| ||||||||| || ||||| || | || ||| | | ||||||||| Sbjct 111409 CCTTGAATACCAATACCAATTGGTCTGTGACGGAGGTTGCTAG---TCTTAGCTTCTGGG 111353 Query 62832 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTG--ACC 62888 | ||||||||||| |||| ||||| || ||||||||||| || | ||||| || Sbjct 111352 ACTGGATAATAATTTCTATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACT 111293 Query 62889 ACAT------CCT-----------TCAG----TTTGAGAAAATCAAATC----------- 62916 ||| ||| ||| ||| | ||| | || Sbjct 111292 TCATATAAAGCCTGATGATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTG 111233 Query 62917 ----GCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACC 62972 | | ||| | | |||| | ||||||| ||| || || ||||| || || || Sbjct 111232 TTAGGAACCTCTCTCAAAAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACT 111173 Query 62973 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 63032 || | | | | ||||| || |||||||| || | ||| | || || || Sbjct 111172 TCCTCTGGAGATGTGTATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCC 111113 Query 63033 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63092 || || | |||||| || | ||||| ||||| || || ||||| | || |||||| Sbjct 111112 AAGTTCTTTTGATTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCA 111053 Query 63093 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63152 |||||||| |||||||| | ||| || ||| | || ||||||| | | ||| Sbjct 111052 GTTTCAATTTGAGATTCCACAATAGCAAACCACAAATCTTGAGCCTTAACAACT--TTTC 110995 Query 63153 TATCT---CCTTTCTCTT--TCGTATA-GAGTATACAATCGTTCGAACTCGTCTCCCCAA 63206 || || ||| || || ||| ||| ||| | | | ||| || ||||| Sbjct 110994 TAGCTAATCCTGGAGTTTGTTCATATTTGAG-ATAAAGTTTTCTGAATTCCTCTCCATGG 110936 Query 63207 -ACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 63265 || || | || || | | ||| ||||| | | ||||| ||| | | | Sbjct 110935 CACTCTGCGAGACCTGGGGCCT-CATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGG 110877 Query 63266 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTCTAT 63324 || |||| ||||||||||||| ||||||||| || ||| |||| || | | | | Sbjct 110876 AACACGTTCCATAAAGAGATCACAAATCCAAAGGGC-ATAGAATAAGTCACGAGCACGAA 110818 Query 63325 GTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACG 63384 || || || || ||| || || ||||| | |||| | | | ||||| ||||| | Sbjct 110817 TCTCTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATG 110758 Query 63385 GTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 63444 | || ||||||| || | | | || | || ||||| || |||| || | || Sbjct 110757 GCTCTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAG 110698 Query 63445 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG 63504 | |||| ||| | || | |||||||| | | ||| || || | || || || || Sbjct 110697 CAGTGTCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCAC 110638 Query 63505 AGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTT 63564 ||||||| | | |||||||| || || || | ||| ||||| || || || Sbjct 110637 GGATATAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATT 110578 Query 63565 TAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCA 63624 || || ||||||||| |||| || || || ||||| || || ||| ||| || ||| Sbjct 110577 TACTAATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCA 110518 Query 63625 TGTTAAGTAGAAAACAGCTAGACATTTG-GTGACGAGTAGTTCCCGCATTAAATAAGGTA 63683 | | || | ||||| ||||| || | || || || || ||||| || || ||| Sbjct 110517 TTTGAACCAAGAAACAAGATGACATCTGAGGGAATGGT-GTACCAGCATTGAACAATGTA 110459 Query 63684 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCT 63743 |||| ||| || |||||| | || || || | || ||||||| ||| | || Sbjct 110458 GGAGTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTC 110399 Query 63744 ATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACA 63803 | || | ||| || || | | ||| | ||| ||||| || ||||||||||| ||| Sbjct 110398 AAGTCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACA 110339 Query 63804 ATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856 || | || || ||| || ||| |||||||||| ||||||||||| Sbjct 110338 ATGATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817174873120