Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20lacteum_20[genbank_20GCA_5F001606155.1_202016-04-04] 54 sequences; 23,375,662 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq36 196 6e-45 seq33 159 5e-34 >seq36 Length=2033623 Score = 196 bits (216), Expect = 6e-45 Identities = 220/294 (75%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 |||| |||||||| ||||||||||| ||||| || || ||||||||||| || || | | Sbjct 729763 TTTCAGAATGAATATTTTCAATGGCAATTTGGAAACCATAGAAACATCTGGCTTCTGGTA 729704 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 | || ||||| | |||| ||||| ||||||||| || || || || |||| Sbjct 729703 TTTGAACTTCACTCATAAATTTAGTTGCTAGATTTTCATTAACAATACCATCTGAAGCTG 729644 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATT---CC 36629 ||||||| || ||||||| || |||| |||||| ||| ||| ||||| || Sbjct 729643 CAAAAAATGCTAATACATTGGAAATGAAATGTTTTTCATTTTCATTTAACTTATTTTCCC 729584 Query 36630 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | ||||||||||| | | || ||| | ||||| ||||||| ||||| || ||||| | Sbjct 729583 ATTCATTGATATCACTGGCTAAATCAATCTCTTCTGCTGTCCAGAATGAGGCTTCTGCTT 729524 Query 36690 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTAT 36743 ||||||||||||||| ||||| | |||| ||||||||| | ||||||||||| Sbjct 729523 GTTTATACATATTCCATATGTCTGGGTATTTAATTGGAAATAGAACAAATCTAT 729470 Score = 145 bits (160), Expect = 1e-29 Identities = 395/593 (67%), Gaps = 25/593 (4%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTT---TTCGAAAAAATTAGTTTTACCTTCTAATGATATA 35923 ||||| |||||| | || ||| ||| ||||| || | ||| | || || || || Sbjct 730408 TTTTGATATTCAGCTAC---TTTACCTTCAAAAAAGTTTGATTTTCTTTGCAAAGAAATC 730352 Query 35924 TTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAA 35983 ||||||| ||||||| |||||| || |||| |||| ||||| | || || ||| Sbjct 730351 ATTTCCATCCAATCGAAAGGATTGGTAGAATTAAAAATCTTTTTGTAACC-AAGAGAGAC 730293 Query 35984 ATCAAT-CTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 36042 | | | | ||||||| ||| || || ||| | ||| | | ||||| || || Sbjct 730292 AACTAGACGATCTGCGCAAAACTCAATGTATTGTGACATGGCTCTGCTGTTCATACCAAT 730233 Query 36043 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 36102 || | |||||| |||| |||| | |||||| | |||| | || || ||| | || Sbjct 730232 GAGATCAACTGGTAGAGATTCAGTTACAAATTCCTTTTCACATGCAACAGCATCTTTGAT 730173 Query 36103 AATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA---ACATCAAACA 36159 ||| ||| | ||| |||| | || | | ||||| | | |||||| Sbjct 730172 AATGTCTATAATGATTTTTTCATCTAATCTATTTACGA---GTTTACTGTAGAGCAAACA 730116 Query 36160 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 36219 || || | || |||||||| || || | |||||| ||||| ||||| || || | || Sbjct 730115 AGCAAAGTTACAATGTAGACCTTCATCACGACTAATCAATTCATTGGAGAATGTCAAACC 730056 Query 36220 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGA-CGCAAATGATCCAGAAAAGAAAA 36278 ||||||| || | || || |||||||| ||||| | ||| | ||| || || | Sbjct 730055 TGGCATTAAACCTCTTTTCTTTAGCCAAAAGATGGAACAGAAACTA-CCACTGAAAAAGA 729997 Query 36279 TTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGTATCC 36338 | ||||| || || ||||| || | | ||||||| || | | || || |||| Sbjct 729996 TACCTTCAACAGCTGCAAATGCCACCAATCTCTCTGCAAAT---GATCTAGAATTGATCC 729940 Query 36339 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT-AAAG 36397 | | ||||| || ||||||||||| ||||| || || || ||||||||||| || Sbjct 729939 ATCTCAAGGCCCATTCTGCCTTCTTTTTCACACATGGAATAGTTTCTATAGCATTGAATA 729880 Query 36398 AGATAGtttttttCATTACT--ATCTTTAACATATGTATCAATCAAAAGACTA 36448 | ||| ||||| | || | ||||| |||||||||||| ||||||||| Sbjct 729879 ATTTAGCTTTTT---GTTCTGGGTTTTTAATATATGTATCAATTAAAAGACTA 729830 >seq33 Length=884058 Score = 159 bits (176), Expect = 5e-34 Identities = 1085/1732 (63%), Gaps = 77/1732 (4%) Strand=Plus/Minus Query 64979 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 65038 ||| || || || || || ||||| |||||||| | || | | ||||| ||| || Sbjct 112001 TTGGTCAATAAAAGCACCTCTGTCAGCAGCCATATCAATCAAGGCTCTTTGTTTAATCTC 111942 Query 65039 CCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGA 65095 ||||| || || |||| | | || | ||| ||||||| | || |||| |||| || Sbjct 111941 CCAAACTGTCTTGTAAAGTTGTTTCAAATCCTCTGGAATCTCTGGAATATTTTGAACAGA 111882 Query 65096 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT--CCATAATTTTCTCTCGGTT 65153 |||| | ||| |||||| | || || | || |||| ||| | | ||| | Sbjct 111881 ACCACGGTGTGCTATAATCTTGTTTTTCAAGTC--CATTGACCACAGTCCAAGCTCCATA 111824 Query 65154 AAAACTCTAAGGAGATGCGGATTAACTACTTG-AAATTCTCCAGACAATACTCTCCGAGT 65212 | | | ||| | ||| ||||| || ||| |||||| || | || ||||| | | Sbjct 111823 AGATCAGAAAGCAATTGCTTATTAA-TAATTGTAAATTCACCTGCTAAGACTCTTCTGGA 111765 Query 65213 GTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGA 65272 || || ||||| || || ||||| | || |||||| || || ||||||||| || || Sbjct 111764 ATATATGTTACTAGTGTATGGTTCAAAAGCCTCATTGTTACCTAAAATTTGACTGGTGGA 111705 Query 65273 TGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATC 65332 || || ||||| || || | || | ||||||||||||| | | ||| | || Sbjct 111704 GGCTGTGGGCATTGGGGCTATTAAAAGTGAGTTTCTAAGACCGTGTTTGGCGATATCTTC 111645 Query 65333 TTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 65392 || || ||| |||||||||| |||| | || || ||| || Sbjct 111644 CTTGAGTTGTTTCCAATTCCAACGATCGGTTGGAGTGACACCCCACATATCGTATTGGAG 111585 Query 65393 AATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAG 65452 ||||| | ||| || || ||| ||| || ||||| ||||| | ||| || Sbjct 111584 TATACCTTGACTTGCTGGAGAACCTTGGAATGATGAATAGGGTCCATCCTTATGAGCGAG 111525 Query 65453 TTCACAACTC--GCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA 65510 ||| ||| || ||| || | | || || || ||| | |||| |||| | | Sbjct 111524 TTCT--ACTGAGGCGCTTAAAGCTGCAAAGTAGATAGTCTCGGAAATCTCAATATTCA-A 111468 Query 65511 TCTTG-TGCTTCCAGGCTATCAAATGGATAATTTAAGAG--AATAAACGCGTCTGCTAAT 65567 | | | ||| | | ||||| || || ||| | || ||| | || || | Sbjct 111467 TTTAGCTGCACCTGTGGATTCAAAAGG-TAGACGAAGGGCTAAGAAAA-CATCAGCAAGA 111410 Query 65568 CCTTGAACACCAATACCGATAGGTCTATGTCTC---TTATTAGAGATTTCAGCTTCTGGA 65624 ||||||| ||||||||| || ||||| || | || ||| | | ||||||||| Sbjct 111409 CCTTGAATACCAATACCAATTGGTCTGTGACGGAGGTTGCTAG---TCTTAGCTTCTGGG 111353 Query 65625 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTA-CTTTG--ACC 65681 | ||||||||||| |||| ||||| || ||||||||||| || | ||||| || Sbjct 111352 ACTGGATAATAATTTCTATCAATAATCTTGTTGAGATTTCTAGTTATAATCTTTGTAACT 111293 Query 65682 ACAT------CCT-----------TCAG----TTTGAGAAAATCAAATC----------- 65709 ||| ||| ||| ||| | ||| | || Sbjct 111292 TCATATAAAGCCTGATGATCAAATTCAAAGGCTTTCTTATAATAAGATTCTGGATTGGTG 111233 Query 65710 ----GCTCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACC 65765 | | ||| | | |||| | ||||||| ||| || || |||||||| || || Sbjct 111232 TTAGGAACCTCTCTCAAAAACTTTGGTAATGCAATAGAGGCAAGGTTACAAACTGCGACT 111173 Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 65825 || | | | | ||||| || |||||||| || | ||| | ||||| || Sbjct 111172 TCCTCTGGAGATGTGTATTGAATAATCTCAGTACACAAATTGGATGATGAAATGGTACCC 111113 Query 65826 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 65885 || || | |||||| || | ||||| ||||| || || ||||| | || |||||| Sbjct 111112 AAGTTCTTTTGATTTGATTTCTCATTACAAGCATCTTTGTAGAGAATATAAGGTGTACCA 111053 Query 65886 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 65945 |||||||| |||||||| | ||| || ||| | || ||||||| | | ||| Sbjct 111052 GTTTCAATTTGAGATTCCACAATAGCAAACCACAAATCTTGAGCCTTAACAACT--TTTC 110995 Query 65946 TATCT----CTTTTCTCT-TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAA 66000 || || || | | ||| ||| ||| | | | ||| || ||||| Sbjct 110994 TAGCTAATCCTGGAGTTTGTTCATATTTGAGATAAAGTTTTCTGAATTCCTCTCCATGG- 110936 Query 66001 CATTGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 66059 || | | | | || || |||| ||||| | | ||||| ||| | | | Sbjct 110935 CACTCTGCGAGACCTGGGGCCTCATTAGGACAAAAGAGGGACCAATCTTCATTTCCAGGA 110876 Query 66060 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAAATCTCTGGTTCTATG 66118 || |||| ||||||||||||| ||||||||| || ||| ||||| || | | | | Sbjct 110875 ACACGTTCCATAAAGAGATCACAAATCCAAAGGGC-ATAGAATAAGTCACGAGCACGAAT 110817 Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 || || || || ||| || || ||||| | |||| | | | |||| ||||| || Sbjct 110816 CTCTTCCTTACCATGATTTTTCTTTAGATCCAAGAACTCAAAGACATCAGCGTGCCATGG 110757 Query 66179 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 66238 || ||||||| || | | | || | || ||||| || |||| || | ||| Sbjct 110756 CTCTAAGTATACTGCAAAAGCACCTTTTCTCTTACCGCCTCCTTGGTCTACATAACGAGC 110697 Query 66239 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 66298 |||| ||| | || | |||||||| | | ||||||||| || || || || || Sbjct 110696 AGTGTCGTTAAATACACGTAACATTGGTACTAAACCATTGGAAGTTCCGTTAGTTCCACG 110637 Query 66299 GATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 66358 ||||||| | | |||||||| || || || | ||| ||||| || || ||| Sbjct 110636 GATATAGGATTGAGCAGCACGAATCTTGTGAACTGCAATACCAATTCCACCAGCAGATTT 110577 Query 66359 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 66418 | || ||||||||| |||| || ||||| ||||| || || || ||| || |||| Sbjct 110576 ACTAATCAATGCGCATTGTTTCAAAGTATCGTAGATACCGTCAATGGAATCCTCTTTCAT 110517 Query 66419 GTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAGTTCCCGCATTAAATAAGGTAG 66477 | || | ||||| ||||| || | || | || || ||||| || || |||| Sbjct 110516 TTGAACCAAGAAACAAGATGACATCTGAGGGAATGGT-GTACCAGCATTGAACAATGTAG 110458 Query 66478 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 66537 ||| ||| || |||||| | || || || | || ||||||| ||| | || | Sbjct 110457 GAGTAGCATGAGTAAACAACTTCATGGAGAGCTTTTCATAAGTCTCAAAAGCAGCGTTCA 110398 Query 66538 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597 || | ||| || || | | ||| | ||| ||||| || ||||||||||| || | Sbjct 110397 AGTCAGTTCCATGTATACCAATAGAGACTCTCATCAACATATGTTGAGGTCTTTCCACAA 110338 Query 66598 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 66649 | | || || ||| || ||| |||||||||| ||||||||||| Sbjct 110337 TGATACCATTGATACGTTGCAAATATGATCTTTCCAAAGTCTTAAAACCAAA 110286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172355733360